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CAZyme Information: CAP93034:RNA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Penicillium rubens | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Aspergillaceae; Penicillium; Penicillium rubens | |||||||||||
| CAZyme ID | CAP93034:RNA-p1 | |||||||||||
| CAZy Family | GH3 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH134 | 36 | 194 | 2e-81 | 0.9937106918238994 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 381622 | mannanase_GH134 | 1.26e-88 | 33 | 194 | 1 | 162 | glycosyl hydrolase family 134 inverting endo-beta-1,4-mannanase. glycosyl hydrolase family 134 beta-mannanase (E.C. 3.2.1.78) differs from other mannanases in as it has a hen egg white lysozyme fold and cleaves beta-1,4-mannans with inversion of sterochemistry. Beta-mannosidases are enzymes involved in seed germination and the degradation of the hemicellulose fraction of soft- and hardwoods. |
| 381610 | chitinase-like | 4.80e-04 | 59 | 129 | 2 | 72 | chitinase-like domain. This family includes proteins such as chitinases, chitosanase, pesticin, and endolysin, which are involved in the degradation of 1,4-N-acetyl D-glucosamine linkages in chitin polymers and related activities. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Chitosanase enzymes hydrolyze chitosan, a biopolymer of beta (1,4)-linked-D-glucosamine (GlcN) residues produced by partial or full deacetylation of chitin. Pesticin (Pst) is a anti-bacterial toxin produced by Yersinia pestis that acts through uptake by the target related bacteria and the hydrolysis of peptidoglycan in the periplasm. The dsDNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall heteropolymer peptidoglycan and cell division. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 7.96e-139 | 1 | 194 | 1 | 194 | |
| 4.08e-109 | 1 | 194 | 1 | 193 | |
| 3.09e-101 | 1 | 194 | 1 | 180 | |
| 1.97e-100 | 1 | 194 | 1 | 193 | |
| 3.60e-100 | 1 | 194 | 1 | 180 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 8.31e-68 | 36 | 194 | 4 | 162 | Mannanase(RmMan134A) [Rhizopus microsporus],5XTJ_B Mannanase(RmMan134A) [Rhizopus microsporus],5XTT_A Crystal structure of RmMan134A-M3 complex [Rhizopus microsporus],5XTT_B Crystal structure of RmMan134A-M3 complex [Rhizopus microsporus],5XU5_A Complex structure of RmMan134A-M4 [Rhizopus microsporus],5XU5_B Complex structure of RmMan134A-M4 [Rhizopus microsporus],5XUG_A Complex structure(RmMan134A-M5). [Rhizopus microsporus],5XUG_B Complex structure(RmMan134A-M5). [Rhizopus microsporus],5XUL_A Complex structure (RmMan134A-M6). [Rhizopus microsporus],5XUL_B Complex structure (RmMan134A-M6). [Rhizopus microsporus] |
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| 1.37e-66 | 36 | 194 | 4 | 162 | beta-1,4-mannanase-SeMet-RmMan134A [Rhizopus microsporus],5XXA_B beta-1,4-mannanase-SeMet-RmMan134A [Rhizopus microsporus] |
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| 1.97e-60 | 36 | 194 | 10 | 168 | Structure of a beta-1,4-mannanase, SsGH134, in complex with Man3. [Streptomyces sp. NRRL B-24361] |
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| 2.31e-60 | 36 | 194 | 15 | 173 | Structure of a beta-1,4-mannanase, SsGH134. [Streptomyces sp.] |
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| 5.61e-60 | 36 | 194 | 10 | 168 | Structure of an inactive (E45Q) variant of a beta-1,4-mannanase, SsGH134, in complex with Man5 [Streptomyces sp. NRRL B-16215] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000310 | 0.999689 | CS pos: 21-22. Pr: 0.7815 |