logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: CAP92450:RNA-p1

You are here: Home > Sequence: CAP92450:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Penicillium rubens
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Penicillium; Penicillium rubens
CAZyme ID CAP92450:RNA-p1
CAZy Family GH2
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
600 Pc00c13|CGC7 68857.02 5.1359
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PrubensWisconsin54-1255 14021 500485 1464 12557
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CAP92450:RNA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT90 301 584 2.1e-71 0.98

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
214773 CAP10 2.35e-09 320 582 28 251
Putative lipopolysaccharide-modifying enzyme.
310354 Glyco_transf_90 6.05e-05 475 582 212 321
Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 600 1 600
5.70e-242 49 597 59 623
1.80e-241 51 596 61 609
1.69e-238 50 596 60 609
4.87e-221 51 597 72 624

PDB Hits      help

CAP92450:RNA-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.59e-46 50 589 151 661
Beta-1,2-xylosyltransferase 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=CXT1 PE=1 SV=1
8.34e-06 475 583 357 465
Protein O-glucosyltransferase 2 OS=Danio rerio OX=7955 GN=poglut2 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.801613 0.198400

TMHMM  Annotations      download full data without filtering help

Start End
12 31