logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: CAP86440:RNA-p1

You are here: Home > Sequence: CAP86440:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Penicillium rubens
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Penicillium; Penicillium rubens
CAZyme ID CAP86440:RNA-p1
CAZy Family GH13
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
267 Pc00c20|CGC18 27600.04 5.8410
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PrubensWisconsin54-1255 14021 500485 1464 12557
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CAP86440:RNA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE1 45 168 9.7e-20 0.5594713656387665

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
226040 LpqC 1.46e-12 39 195 46 209
Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport and catabolism].
223489 DLH 1.62e-06 112 191 93 173
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism].
226584 COG4099 1.38e-04 44 198 178 337
Predicted peptidase [General function prediction only].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.23e-89 21 264 36 285
7.04e-87 17 264 90 352
3.51e-84 18 264 35 296
4.31e-83 14 264 45 311
2.91e-82 19 264 24 273

PDB Hits      help

CAP86440:RNA-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.28e-159 3 267 6 270
Feruloyl esterase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=faeC PE=1 SV=1
1.48e-155 3 267 6 270
Probable feruloyl esterase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=faeC PE=3 SV=1
2.11e-155 3 267 6 270
Probable feruloyl esterase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=faeC PE=3 SV=2
2.86e-153 7 267 10 270
Probable feruloyl esterase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=faeC PE=3 SV=1
2.79e-149 21 267 26 272
Probable feruloyl esterase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=faeC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000228 0.999708 CS pos: 18-19. Pr: 0.9793

TMHMM  Annotations      help

There is no transmembrane helices in CAP86440:RNA-p1.