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CAZyme Information: CAP85938:RNA-p1

You are here: Home > Sequence: CAP85938:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Penicillium rubens
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Penicillium; Penicillium rubens
CAZyme ID CAP85938:RNA-p1
CAZy Family GH1
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
847 90320.30 4.3755
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PrubensWisconsin54-1255 14021 500485 1464 12557
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.5.1.-:2 3.5.1.-:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE18 411 778 4.6e-183 0.997275204359673
CBM87 194 410 5.9e-113 0.9954128440366973

CDD Domains      help

CAP85938:RNA-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 847 1 847
0.0 1 847 2 913
0.0 180 847 133 801
0.0 180 847 133 801
0.0 186 847 141 804

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
0.0 183 847 19 684
Crystal structure of Agd3 a novel carbohydrate deacetylase [Aspergillus fumigatus Af293]

Swiss-Prot Hits      help

CAP85938:RNA-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.996185 0.003840

TMHMM  Annotations      help

There is no transmembrane helices in CAP85938:RNA-p1.