CAZyme Information: CAP81082:RNA-p1

Basic Information

• Species: Penicillium rubens
• Lineage: Ascomycota; Eurotiomycetes; ; Aspergillaceae; Penicillium; Penicillium rubens
• CAZyme ID: CAP81082:RNA-p1
• CAZy Family: CBM50
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
918		98241.57	6.4269

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PrubensWisconsin54-1255	14021	500485	1464	12557

• Gene Location: location=Pc00c12:3476825-3479688(+)

Full Sequence      

MRGFPFLASVAAVSTASGAIVPLNSVRASSSYVLSSTIIHSRPAYDYYDYPFDWALASSL
AGLTGAPPTATVHQHGTTTSPCTANTLSTAAEFTPKPVNASTGTPSQKAASSSSKMMQPT
WTAVNSNSAAPNTLATSVKTSTPLPKTHTQSTRASVPTPSPMSQKDHSPATKTCAAPTGK
SPETYWLDEQDHNQRGAGFAPYAKTSLYPVYRNVMDYSVVNDGSGNQTPKLQKAIDDDGA
GGSRKGHGVTRYPALVYLPGGVYQLESTLNLTVGTIIVGNPLNPPIIKAAPGFRGDYLIM
GYDSHNGNPETSFATLVKNVIMDTTALSPDRHFTALQWGVAQGSGLTNVKIRMPKSSTGH
TGIDINAGSTIAVTDVHITGGAIGIKNSNQQVNFKNIYFHSCRTAFSAAGGWTVLLQQAT
FYSCGTGIDMTGNGLGSLVLLDSTSVNSGPVIRFYDSSHDSGNRNSQFLIQNLKHDTPNA
IAVDAHGNVALAATPYVDTWVWGTVVPETYQTGASWETKRPAALVVGDKYFTKAQPTYQD
YSAADIVNVKTVSGHTVKGDGKTDDTEALNAILAQNADSCKVTYIPFGVYRVSNTIFVPV
GTRMVGEAWSVISGYGDNFKDPNNPRPVVQLGNPGDVGVIEIQEMRFSVGEPLPGAKIIE
INAAGDKPGDVGLWNTMGMVGGTADTSISSACTSQDPKDCMAAFMVMHLTKSSSAYIENF
WGWTADHNIDSESLLTIISTGRGILVESTKATWLTGTGSEHHWLYNYNFHNAQNVFAGLL
QTETPYMQGQGEYRAAPEPWTAVAKYGDPDFSWCAADDQKCRTAIATNVDGGSNIALYNS
AAWAFFDGYWNGLYNEPCNGNCQTNMMRVTNEPQNLVWYSISTRMTDVMVLDGKSNPRQS
DHRGGWEGIIQVYGQFTA

Enzyme Prediction     

No EC number prediction in CAP81082:RNA-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH55	180	913	2.6e-238	0.9851351351351352

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
403800	Pectate_lyase_3	7.50e-60	211	429	1	213	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
403800	Pectate_lyase_3	1.50e-05	546	608	1	62	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CAP81082.1|GH55	0.0	1	918	1	918
QQK40875.1|GH55	0.0	1	918	1	917
BAE58922.1|GH55	0.0	170	917	60	806
QMW41258.1|GH55	0.0	170	917	60	806
QRD85481.1|GH55	0.0	170	917	60	806

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5M5Z_A	2.08e-111	181	918	2	757	Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila],5M60_A Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila]
3EQN_A	1.28e-106	168	883	13	724	Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|P53626|E13B_TRIHA	3.27e-140	180	906	32	750	Glucan endo-1,3-beta-glucosidase BGN13.1 OS=Trichoderma harzianum OX=5544 GN=bgn13.1 PE=1 SV=1
sp|P49426|EXG1_COCCA	1.10e-112	185	869	48	740	Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum OX=5017 GN=EXG1 PE=1 SV=1
sp|D4B0V1|E13B_ARTBC	5.31e-100	177	915	31	875	Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02077 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.129139	0.870824	CS pos: 18-19. Pr: 0.7690

TMHMM  Annotations     

There is no transmembrane helices in CAP81082:RNA-p1.