CAZyme Information: CAP81013:RNA-p1

Basic Information

• Species: Penicillium rubens
• Lineage: Ascomycota; Eurotiomycetes; ; Aspergillaceae; Penicillium; Penicillium rubens
• CAZyme ID: CAP81013:RNA-p1
• CAZy Family: CBM21
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
568	Pc00c12|CGC18	62452.09	5.0955

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PrubensWisconsin54-1255	14021	500485	1464	12557

• Gene Location: location=Pc00c12:3321487-3323305(+)

Full Sequence      

MGSTGNNYDFVIVGGGPAGCALAAGLAKSAERPQVLLLEAGGRNDDNALRVDGKRWTTFM
EGKLNWGYKTTPQEHCNGRELDYSRGKGLGGSSAINFGVYSVGARDDYNEWASAVGDDTF
AWEEMQTRFKDLETFNGGVTLLKNRKYANSVASDHGNSGDLRVGYAEDWERDLSLSLDAF
EAAGHKLNLDHNSGNPLGMAATINSAHKGKRTTAVDLLSGAPANLVVVTDSPVQRILLQG
KKAVGVEAQGKQYFASRDVILSAGSLDTPKILMHSGIGPAADLEKFNIPVVNDLPAIGQG
LRDHYFVPLILARKPETNDRNSFFQDPAAMEAAMKQWEDDNTGLWTRYGCQVGSGWFKSD
RITSSPEFKALPASVQEFMNRETIPHYEMVTHLPIHYMLPDMFKDYSYVGLAAFLMNEQS
RGEVRLQSSDPEVPLLFNPRFLEDPFDRRACIEIYRHLLEVSSQECFAKDTIATLIGPAS
DSDEDILEFWKNFLSSSWHMTGTVKMGKIDASDAAVDSHFRVRGMENLRVADMSVVPVLT
NNHTQATAYVTGVTCADVLIKEHGLNEQ

Enzyme Prediction     

No EC number prediction in CAP81013:RNA-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA3	7	561	5.1e-149	0.9947183098591549

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
225186	BetA	2.33e-77	1	565	1	539	Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000	PRK02106	1.48e-75	3	557	1	529	choline dehydrogenase; Validated
398739	GMC_oxred_C	1.48e-36	419	552	2	140	GMC oxidoreductase. This domain found associated with pfam00732.
366272	GMC_oxred_N	9.74e-27	76	305	14	217	GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420	PLN02785	1.47e-24	6	552	54	569	Protein HOTHEAD

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CAK46531.1|AA3_2	8.74e-297	1	566	1	566
BCR99292.1|AA3_2	4.78e-294	1	566	1	566
BCS11595.1|AA3_2	4.78e-294	1	566	1	566
BCS19530.1|AA3_2	5.52e-276	6	565	6	566
UPL00845.1|AA3_2	1.60e-257	6	565	4	564

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4H7U_A	1.32e-53	4	549	37	587	Crystal structure of pyranose dehydrogenase from Agaricus meleagris, wildtype [Leucoagaricus meleagris]
5OC1_A	3.16e-50	7	559	1	561	Crystal structure of aryl-alcohol oxidase from Pleurotus eryngii in complex with p-anisic acid [Pleurotus eryngii]
3FIM_B	3.21e-50	7	559	2	562	Crystal structure of aryl-alcohol-oxidase from Pleurotus eryingii [Pleurotus eryngii]
3T37_A	7.92e-44	7	540	17	501	Crystal structure of pyridoxine 4-oxidase from Mesorbium loti [Mesorhizobium loti]
4HA6_A	8.16e-44	7	540	1	485	Crystal structure of pyridoxine 4-oxidase - pyridoxamine complex [Mesorhizobium loti]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q0R4L2|PDH3_LEUMG	1.08e-59	7	560	40	595	Pyranose dehydrogenase 3 OS=Leucoagaricus meleagris OX=201219 GN=pdh3 PE=2 SV=1
sp|Q9WWW2|ALKJ_PSEPU	1.14e-59	8	562	2	530	Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida OX=303 GN=alkJ PE=3 SV=1
sp|A1CFL2|PATE_ASPCL	4.75e-59	1	549	43	614	Patulin synthase OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=patE PE=1 SV=1
sp|Q47944|SDH_GLUOY	3.86e-58	6	559	3	527	L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans OX=442 PE=3 SV=1
sp|A0A075TRK9|PATE_PENEN	6.44e-58	8	549	52	614	Patulin synthase OS=Penicillium expansum OX=27334 GN=patE PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000001	0.000036

TMHMM  Annotations     

There is no transmembrane helices in CAP81013:RNA-p1.