logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: CAP80972:RNA-p1

You are here: Home > Sequence: CAP80972:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Penicillium rubens
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Penicillium; Penicillium rubens
CAZyme ID CAP80972:RNA-p1
CAZy Family AA9
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
563 Pc00c12|CGC24 63531.55 5.5779
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PrubensWisconsin54-1255 14021 500485 1464 12557
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 133 558 9.5e-81 0.986013986013986

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395176 Glyco_hydro_1 2.27e-61 133 557 4 450
Glycosyl hydrolase family 1.
225343 BglB 3.47e-57 132 548 2 443
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215435 PLN02814 5.93e-33 129 536 20 459
beta-glucosidase
215455 PLN02849 1.78e-31 134 542 30 465
beta-glucosidase
215539 PLN02998 3.91e-28 134 536 31 464
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 563 1 563
0.0 29 563 57 620
1.52e-289 29 558 24 580
1.77e-285 29 561 57 618
5.06e-275 16 555 21 586

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.30e-56 134 538 89 549
Chain A, Beta-hexosyltransferase [Hamamotoa singularis],7L74_B Chain B, Beta-hexosyltransferase [Hamamotoa singularis]
2.30e-56 134 538 89 549
Crystal structure of a GH1 beta-glucosidase from Hamamotoa singularis [Hamamotoa singularis]
8.33e-56 134 538 57 517
Crystal structure of the E496A mutant of HsBglA in complex with 4-galactosyllactose [Hamamotoa singularis],6M55_D Crystal structure of the E496A mutant of HsBglA in complex with 4-galactosyllactose [Hamamotoa singularis]
1.62e-55 134 538 89 549
Crystal structure of the E496A mutant of HsBglA [Hamamotoa singularis],6M4F_C Crystal structure of the E496A mutant of HsBglA [Hamamotoa singularis],6M4F_E Crystal structure of the E496A mutant of HsBglA [Hamamotoa singularis],6M4F_G Crystal structure of the E496A mutant of HsBglA [Hamamotoa singularis]
7.11e-52 132 559 10 472
Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with Tris [Neotermes koshunensis],3VIF_A Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with gluconolactone [Neotermes koshunensis],3VIG_A Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with 1-deoxynojirimycin [Neotermes koshunensis],3VIH_A Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with glycerol [Neotermes koshunensis],3VII_A Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with Bis-Tris [Neotermes koshunensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.95e-49 135 547 7 448
Beta-glucosidase 1A OS=Phanerodontia chrysosporium OX=2822231 GN=BGL1A PE=1 SV=1
4.88e-49 135 547 12 463
Beta-glucosidase 1B OS=Phanerodontia chrysosporium OX=2822231 GN=BGL1B PE=1 SV=1
4.81e-46 133 547 37 498
Beta-glucosidase 34 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU34 PE=2 SV=1
1.22e-45 134 562 21 486
Beta-glucosidase 42 OS=Arabidopsis thaliana OX=3702 GN=BGLU42 PE=2 SV=1
2.05e-45 134 547 15 463
Beta-glucosidase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU4 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999722 0.000323

TMHMM  Annotations      help

There is no transmembrane helices in CAP80972:RNA-p1.