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CAZyme Information: CAP80630:RNA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Penicillium rubens | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Aspergillaceae; Penicillium; Penicillium rubens | |||||||||||
| CAZyme ID | CAP80630:RNA-p1 | |||||||||||
| CAZy Family | AA7 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 113 | 297 | 6.9e-91 | 0.9893048128342246 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 1.07e-55 | 113 | 299 | 2 | 190 | Amb_all domain. |
| 366158 | Pec_lyase_C | 2.31e-15 | 123 | 295 | 30 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
| 226384 | PelB | 1.46e-14 | 24 | 297 | 32 | 275 | Pectate lyase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.09e-271 | 1 | 373 | 1 | 373 | |
| 1.07e-230 | 1 | 373 | 1 | 373 | |
| 1.07e-230 | 1 | 373 | 1 | 373 | |
| 6.18e-230 | 1 | 373 | 1 | 373 | |
| 8.78e-230 | 1 | 373 | 1 | 373 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.97e-177 | 20 | 373 | 1 | 359 | Pectin Lyase A [Aspergillus niger] |
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| 3.25e-176 | 20 | 373 | 1 | 359 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
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| 2.42e-159 | 21 | 357 | 2 | 341 | Pectin Lyase B [Aspergillus niger] |
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| 3.55e-10 | 128 | 298 | 80 | 249 | Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5] |
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| 3.67e-08 | 123 | 296 | 128 | 331 | Structure of the thermostable pectate lyase PL 47 [Bacillus sp. TS-47] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.10e-230 | 1 | 373 | 1 | 373 | Pectin lyase D OS=Aspergillus niger OX=5061 GN=pelD PE=1 SV=1 |
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| 1.56e-230 | 1 | 373 | 1 | 373 | Probable pectin lyase D OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelD PE=3 SV=1 |
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| 4.93e-216 | 1 | 373 | 1 | 375 | Pectin lyase 2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pel2 PE=1 SV=1 |
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| 4.93e-216 | 1 | 373 | 1 | 375 | Probable pectin lyase D OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelD PE=3 SV=1 |
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| 8.20e-208 | 1 | 373 | 1 | 375 | Probable pectin lyase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pelB PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000240 | 0.999713 | CS pos: 19-20. Pr: 0.9800 |