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CAZyme Information: CAP80405:RNA-p1

You are here: Home > Sequence: CAP80405:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Penicillium rubens
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Penicillium; Penicillium rubens
CAZyme ID CAP80405:RNA-p1
CAZy Family AA4
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
302 33308.40 4.3563
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PrubensWisconsin54-1255 14021 500485 1464 12557
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.109:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH114 70 260 2.3e-77 0.9947368421052631

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397552 Glyco_hydro_114 2.47e-112 69 297 1 221
Glycoside-hydrolase family GH114. This family is recognized as a glycosyl-hydrolase family, number 114. It is endo-alpha-1,4-polygalactosaminidase, a rare enzyme. It is proposed to be TIM-barrel, the most common structure amongst the catalytic domains of glycosyl-hydrolases.
226386 COG3868 1.96e-23 69 261 62 267
Predicted glycosyl hydrolase, GH114 family [Carbohydrate transport and metabolism].
225219 COG2342 1.24e-05 69 260 28 251
Endo alpha-1,4 polygalactosaminidase, GH114 family (was erroneously annotated as Cys-tRNA synthetase) [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.84e-227 1 302 1 302
1.55e-158 9 302 2 384
4.23e-109 60 302 73 318
4.23e-109 55 302 68 318
5.00e-109 60 302 78 323

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.66e-111 60 302 32 277
Crystal Structure of Aspergillus fumigatus Ega3 [Aspergillus fumigatus Af293]
6.52e-111 60 302 49 294
Crystal Structure of Aspergillus fumigatus Ega3 complex with galactosamine [Aspergillus fumigatus Af293]

Swiss-Prot Hits      help

CAP80405:RNA-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999989 0.000035

TMHMM  Annotations      download full data without filtering help

Start End
19 41