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CAZyme Information: CAP79628:RNA-p1

You are here: Home > Sequence: CAP79628:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Penicillium rubens
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Penicillium; Penicillium rubens
CAZyme ID CAP79628:RNA-p1
CAZy Family AA13|CBM20
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
397 Pc00c12|CGC23 43002.65 4.3959
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PrubensWisconsin54-1255 14021 500485 1464 12557
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CAP79628:RNA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 27 348 9.7e-110 0.5598591549295775

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
235000 PRK02106 2.35e-65 27 336 5 298
choline dehydrogenase; Validated
225186 BetA 5.76e-51 24 336 4 302
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
366272 GMC_oxred_N 3.74e-33 101 338 20 217
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420 PLN02785 2.59e-21 23 340 51 330
Protein HOTHEAD
235787 PRK06370 1.21e-05 25 58 3 35
FAD-containing oxidoreductase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.34e-182 24 397 16 390
7.10e-180 1 397 1 396
1.24e-178 18 397 17 396
1.24e-178 18 397 17 396
1.24e-178 18 397 17 396

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.59e-136 24 397 2 375
Crystal structure of Aspergillus flavus FAD glucose dehydrogenase [Aspergillus flavus NRRL3357],4YNU_A Crystal structure of Aspergillus flavus FADGDH in complex with D-glucono-1,5-lactone [Aspergillus flavus NRRL3357]
4.53e-63 24 385 13 380
Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina],6XUU_A Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina],6XUV_A Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina]
9.88e-56 24 385 21 381
Glucose Oxidase From Penicillium Amagasakiense [Penicillium amagasakiense],1GPE_B Glucose Oxidase From Penicillium Amagasakiense [Penicillium amagasakiense]
1.29e-55 17 385 11 377
GLUCOSE OXIDASE FROM APERGILLUS NIGER [Aspergillus niger],1GAL_A CRYSTAL STRUCTURE OF GLUCOSE OXIDASE FROM ASPERGILLUS NIGER: REFINED AT 2.3 ANGSTROMS RESOLUTION [Aspergillus niger],3QVP_A Crystal structure of glucose oxidase for space group C2221 at 1.2 A resolution [Aspergillus niger],3QVR_A Crystal structure of glucose oxidase for space group P3121 at 1.3 A resolution. [Aspergillus niger]
4.67e-55 17 385 9 375
Glucose oxidase mutant A2 [Aspergillus niger]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.54e-55 24 385 39 399
Glucose oxidase OS=Talaromyces flavus OX=5095 GN=GOX PE=3 SV=1
5.08e-55 24 385 21 381
Glucose oxidase OS=Penicillium amagasakiense OX=63559 PE=1 SV=1
9.52e-55 17 385 33 399
Glucose oxidase OS=Aspergillus niger OX=5061 GN=gox PE=1 SV=1
3.14e-53 20 355 41 379
GMC oxidoreductase family protein Mala s 12 OS=Malassezia sympodialis (strain ATCC 42132) OX=1230383 GN=MSY001_2108 PE=1 SV=1
3.14e-53 20 355 41 379
GMC oxidoreductase family protein Mala s 12.0101 OS=Malassezia sympodialis OX=76777 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.009127 0.990837 CS pos: 18-19. Pr: 0.9601

TMHMM  Annotations      help

There is no transmembrane helices in CAP79628:RNA-p1.