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CAZyme Information: CAGL0F09053g-T-p1

You are here: Home > Sequence: CAGL0F09053g-T-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species [Candida] glabrata
Lineage Ascomycota; Saccharomycetes; ; Debaryomycetaceae; Candida; [Candida] glabrata
CAZyme ID CAGL0F09053g-T-p1
CAZy Family GH5
CAZyme Description Ortholog(s) have carbohydrate binding, mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
809 ChrF_C_glabrata_CBS138|CGC9 94129.22 5.5478
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CglabrataCBS138 5615 284593 322 5293
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.113:6

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH47 45 486 2.4e-123 0.9910313901345291

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396217 Glyco_hydro_47 1.09e-149 44 486 3 453
Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2).
240427 PTZ00470 3.32e-59 31 488 67 520
glycoside hydrolase family 47 protein; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 809 1 809
0.0 1 809 1 809
0.0 1 809 1 809
0.0 1 809 1 809
0.0 1 809 1 809

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.63e-42 57 484 27 449
Crystal structure of the class I human endoplasmic reticulum 1,2-alpha-mannosidase and Man9GlcNAc2-PA complex [Homo sapiens]
1.08e-41 57 484 32 454
Crystal Structure Of Human Class I Alpha1,2-Mannosidase [Homo sapiens]
1.12e-41 57 484 32 454
Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin [Homo sapiens],1FO3_A Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With Kifunensine [Homo sapiens]
3.00e-41 16 484 69 532
Crystal Structure Of Human Class I alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue [Homo sapiens]
4.69e-41 57 484 27 449
Crystal structure of the class I human endoplasmic reticulum 1,2-alpha-mannosidase T688A mutant and Thio-disaccharide substrate analog complex [Homo sapiens],5KK7_B Crystal structure of the class I human endoplasmic reticulum 1,2-alpha-mannosidase T688A mutant and Thio-disaccharide substrate analog complex [Homo sapiens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.07e-235 26 809 26 796
ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MNL1 PE=1 SV=1
7.19e-110 34 503 125 602
ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Homo sapiens OX=9606 GN=EDEM1 PE=1 SV=1
2.43e-109 24 502 110 596
ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Mus musculus OX=10090 GN=Edem1 PE=1 SV=1
1.52e-106 34 487 34 478
ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mnl1 PE=3 SV=2
1.58e-86 31 487 36 474
Alpha-mannosidase I MNS4 OS=Arabidopsis thaliana OX=3702 GN=MNS4 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000208 0.999750 CS pos: 16-17. Pr: 0.9799

TMHMM  Annotations      help

There is no transmembrane helices in CAGL0F09053g-T-p1.