logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: Bcin16g04870.1:RNA-p1

You are here: Home > Sequence: Bcin16g04870.1:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Botrytis cinerea
Lineage Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea
CAZyme ID Bcin16g04870.1:RNA-p1
CAZy Family GT71
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
662 73746.51 5.5518
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_BcinereaB05-10 12073 332648 366 11707
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in Bcin16g04870.1:RNA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH154 24 373 1e-123 0.9971264367816092

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
401852 DUF2264 1.35e-177 24 374 1 351
Uncharacterized protein conserved in bacteria (DUF2264). Members of this family of hypothetical bacterial proteins have no known function.
226739 COG4289 2.74e-94 25 486 28 458
Uncharacterized protein [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 662 1 662
0.0 1 661 1 661
0.0 160 662 1 503
0.0 1 660 1 663
0.0 1 660 1 660

PDB Hits      help

Bcin16g04870.1:RNA-p1 has no PDB hit.

Swiss-Prot Hits      help

Bcin16g04870.1:RNA-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000064 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in Bcin16g04870.1:RNA-p1.