logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: Bcin15g03870.1:RNA-p1

You are here: Home > Sequence: Bcin15g03870.1:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Botrytis cinerea
Lineage Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea
CAZyme ID Bcin15g03870.1:RNA-p1
CAZy Family GT8
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
257 25624.28 7.5811
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_BcinereaB05-10 12073 332648 366 11707
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in Bcin15g03870.1:RNA-p1.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395595 CBM_1 1.34e-10 221 249 1 29
Fungal cellulose binding domain.
197593 fCBD 2.53e-10 220 253 1 34
Fungal-type cellulose-binding domain. Small four-cysteine cellulose-binding domain of fungi

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.57e-148 1 257 1 257
3.02e-58 1 257 1 248
4.45e-16 183 253 417 477
1.26e-09 154 253 278 376
2.28e-09 215 253 336 374

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.93e-09 222 253 5 36
Chain A, Exoglucanase 1 [Trichoderma reesei]
3.93e-09 222 253 5 36
Chain A, C-TERMINAL DOMAIN OF CELLOBIOHYDROLASE I [Trichoderma reesei],2CBH_A Chain A, C-TERMINAL DOMAIN OF CELLOBIOHYDROLASE I [Trichoderma reesei],2MWJ_A Chain A, Exoglucanase 1 [Trichoderma reesei],2MWK_A Chain A, Exoglucanase 1 [Trichoderma reesei],5X34_A Chain A, Exoglucanase 1 [Trichoderma reesei],5X35_A Chain A, Exoglucanase 1 [Trichoderma reesei],5X36_A Chain A, Exoglucanase 1 [Trichoderma reesei],5X37_A Chain A, Exoglucanase 1 [Trichoderma reesei],5X38_A Chain A, Exoglucanase 1 [Trichoderma reesei]
1.42e-08 224 253 7 36
Chain A, CELLOBIOHYDROLASE I [Trichoderma reesei],1AZH_A Chain A, CELLOBIOHYDROLASE I [Trichoderma reesei],5X3C_A Chain A, Exoglucanase 1 [Trichoderma reesei]
7.06e-08 222 253 5 36
Chain A, CELLOBIOHYDROLASE I [Trichoderma reesei]
7.06e-08 222 253 5 36
Chain A, CELLOBIOHYDROLASE I [Trichoderma reesei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.94e-07 216 253 328 365
Probable endo-beta-1,4-glucanase D OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=eglD PE=3 SV=1
4.94e-07 216 253 328 365
Probable endo-beta-1,4-glucanase D OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=eglD PE=3 SV=1
1.43e-06 222 253 483 514
Exoglucanase 1 OS=Hypocrea jecorina (strain ATCC 56765 / BCRC 32924 / NRRL 11460 / Rut C-30) OX=1344414 GN=cbh1 PE=1 SV=1
1.43e-06 222 253 482 513
Exoglucanase 1 OS=Hypocrea jecorina OX=51453 GN=cbh1 PE=1 SV=1
1.43e-06 222 253 482 513
Exoglucanase 1 OS=Trichoderma koningii OX=97093 GN=cbh1 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000558 0.999409 CS pos: 19-20. Pr: 0.9701

TMHMM  Annotations      help

There is no transmembrane helices in Bcin15g03870.1:RNA-p1.