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CAZyme Information: Bcin14g05500.1:RNA-p1

You are here: Home > Sequence: Bcin14g05500.1:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Botrytis cinerea
Lineage Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea
CAZyme ID Bcin14g05500.1:RNA-p1
CAZy Family GT2|GT2
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
590 bcin_chr_14|CGC2 63312.37 4.4979
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_BcinereaB05-10 12073 332648 366 11707
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in Bcin14g05500.1:RNA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 23 589 9.2e-170 0.9964788732394366

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
235000 PRK02106 1.57e-80 24 587 6 532
choline dehydrogenase; Validated
225186 BetA 2.82e-80 17 590 1 537
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739 GMC_oxred_C 2.97e-30 441 582 1 143
GMC oxidoreductase. This domain found associated with pfam00732.
366272 GMC_oxred_N 9.00e-29 90 335 14 217
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420 PLN02785 1.66e-21 6 563 38 553
Protein HOTHEAD

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 590 1 590
0.0 1 590 1 589
1.95e-223 5 587 8 583
5.55e-222 4 589 8 587
7.61e-220 5 587 5 580

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.92e-219 20 589 2 567
Crystal structure of Aspergillus flavus FAD glucose dehydrogenase [Aspergillus flavus NRRL3357],4YNU_A Crystal structure of Aspergillus flavus FADGDH in complex with D-glucono-1,5-lactone [Aspergillus flavus NRRL3357]
2.80e-103 24 587 17 588
Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina],6XUU_A Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina],6XUV_A Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina]
8.81e-96 24 589 25 582
Glucose Oxidase From Penicillium Amagasakiense [Penicillium amagasakiense],1GPE_B Glucose Oxidase From Penicillium Amagasakiense [Penicillium amagasakiense]
6.24e-90 25 589 21 578
GLUCOSE OXIDASE FROM APERGILLUS NIGER [Aspergillus niger],1GAL_A CRYSTAL STRUCTURE OF GLUCOSE OXIDASE FROM ASPERGILLUS NIGER: REFINED AT 2.3 ANGSTROMS RESOLUTION [Aspergillus niger],3QVP_A Crystal structure of glucose oxidase for space group C2221 at 1.2 A resolution [Aspergillus niger],3QVR_A Crystal structure of glucose oxidase for space group P3121 at 1.3 A resolution. [Aspergillus niger]
1.17e-89 25 589 19 576
Glucose oxidase mutant A2 [Aspergillus niger]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.53e-95 24 589 25 582
Glucose oxidase OS=Penicillium amagasakiense OX=63559 PE=1 SV=1
3.00e-93 23 586 46 615
GMC oxidoreductase family protein Mala s 12 OS=Malassezia sympodialis (strain ATCC 42132) OX=1230383 GN=MSY001_2108 PE=1 SV=1
3.00e-93 23 586 46 615
GMC oxidoreductase family protein Mala s 12.0101 OS=Malassezia sympodialis OX=76777 PE=1 SV=2
8.99e-92 24 589 43 600
Glucose oxidase OS=Talaromyces flavus OX=5095 GN=GOX PE=3 SV=1
5.59e-89 25 589 43 600
Glucose oxidase OS=Aspergillus niger OX=5061 GN=gox PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.001344 0.998609 CS pos: 16-17. Pr: 0.9595

TMHMM  Annotations      help

There is no transmembrane helices in Bcin14g05500.1:RNA-p1.