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CAZyme Information: Bcin14g03430.1:RNA-p1

You are here: Home > Sequence: Bcin14g03430.1:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Botrytis cinerea
Lineage Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea
CAZyme ID Bcin14g03430.1:RNA-p1
CAZy Family GT22
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
392 bcin_chr_14|CGC4 40653.87 8.2302
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_BcinereaB05-10 12073 332648 366 11707
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in Bcin14g03430.1:RNA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 118 310 1.2e-82 0.9893048128342246

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
214765 Amb_all 1.28e-45 116 312 1 189
Amb_all domain.
226384 PelB 3.91e-24 83 392 42 344
Pectate lyase [Carbohydrate transport and metabolism].
366158 Pec_lyase_C 5.89e-12 129 309 28 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.10e-282 1 392 1 392
5.10e-282 1 392 1 392
1.00e-240 1 392 1 392
2.67e-191 1 392 1 397
9.40e-115 21 392 26 385

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.83e-106 20 391 1 359
Pectin Lyase B [Aspergillus niger]
1.59e-99 22 392 3 359
Pectin Lyase A [Aspergillus niger]
4.66e-96 22 392 3 359
Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger]
7.58e-12 99 309 106 330
Structure of the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]
1.07e-10 129 309 74 276
Chain A, PECTATE LYASE E [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.08e-109 10 392 10 379
Pectin lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelB PE=2 SV=1
1.26e-108 19 392 20 380
Probable pectin lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pelA PE=3 SV=1
2.15e-108 24 382 24 368
Probable pectin lyase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pelB PE=3 SV=2
6.92e-108 16 391 17 379
Probable pectin lyase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelB PE=3 SV=1
3.97e-104 16 391 17 378
Pectin lyase B OS=Aspergillus niger OX=5061 GN=pelB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000251 0.999720 CS pos: 19-20. Pr: 0.9739

TMHMM  Annotations      download full data without filtering help

Start End
7 24