CAZyme Information: Bcin13g04440.1:RNA-p1

Basic Information

• Species: Botrytis cinerea
• Lineage: Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea
• CAZyme ID: Bcin13g04440.1:RNA-p1
• CAZy Family: GT15
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
855		91868.48	4.3784

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_BcinereaB05-10	12073	332648	366	11707

• Gene Location: location=bcin_chr_13:1639171-1641791(-)

Full Sequence      

MAGIVTMTPSIAQYFMTCLLLTTQIAALATGSRISPHPRDLHSLSTSVTKPVKIGLATEP
TLPLSSGGRFELTPSTPVATIDYGHEVAGYPFYDVEFISGKVQIEVKYSEEFIGLDTNFS
DGPFPFASGLSNTYRVETFEVTETGPFEAFLLQGGQRWQSIRLLTSGSVVFSTIGFTASV
PDIDASTLPGGFESDNAVLNDIWALGARASSLACIDRGSQGSMWEFDVNGALVRGMKPGL
TIQGASFQNYTLEFNTMIKRGGIGWAIGIPIATPLGLQLNLIGELPDNTTFVNTNTTLTP
PNSLILSYGYSLVNVTTLPSYRLDVFNTPVIKENTWYTVRTIIDTADNLAVYIDDVEIFN
TSLSSYYVGGTPIQTAGTFGFGGWQDQIGYIKNVIVRDTFNQSLLYNNTMLTDTDLVLTE
YGVHSNLQTTCLDGAKRDRLVWLGDFYHTSRIIPVTTSRNDHLKGTLNTFLDWQIEDGLL
PFAPPIGYNASDAKKTFAFGSGASADLEIYGVVLVDYQILGLISYSNYISSSNDLEFANQ
TWSNWQLLADWLIAQLSPDTGLPVFLSAFLGPSQGSAVSCALVQALSQLAEVAMALNDLA
SAIKYQSAATEISNAVNRQLWNSTIGVYSLSAASPGDYSIAAIGFCITSGTANTTQASQS
LQALEALKLGPGYKDSTQVNSSDLSTNISPNINGFLLAAIISHNASSKALSLLESLWSPM
LSNPKSSTGASWEYVNLEGNPGLGLFTSLAHPWGGAPTYLLTEWAAGLRRADGPSGYGYR
NWVINPDVGLAMGLKTANARVVTAFNGSLSVEWTLNEGVVDVNINAPNNTSGVFEMAGVR
KVLVGGSSYRFDINI

Enzyme Prediction     

No EC number prediction in Bcin13g04440.1:RNA-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	419	833	3.6e-53	0.7440476190476191

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
379972	Bac_rhamnosid_C	6.34e-04	767	851	1	78	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
183934	treF	0.004	543	672	323	447	alpha,alpha-trehalase TreF.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ATZ56607.1|GH78	0.0	1	855	1	855
CCD52401.1|GH78	0.0	34	855	13	831
QMW40986.1|GH78	4.69e-265	51	855	28	827
QMW28911.1|GH78	4.69e-265	51	855	28	827
QRD85156.1|GH78	4.69e-265	51	855	28	827

PDB Hits     

Bcin13g04440.1:RNA-p1 has no PDB hit.

Swiss-Prot Hits     

Bcin13g04440.1:RNA-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.030305	0.969660	CS pos: 31-32. Pr: 0.7668

TMHMM  Annotations     

There is no transmembrane helices in Bcin13g04440.1:RNA-p1.