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CAZyme Information: Bcin13g03350.1:RNA-p1

You are here: Home > Sequence: Bcin13g03350.1:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Botrytis cinerea
Lineage Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea
CAZyme ID Bcin13g03350.1:RNA-p1
CAZy Family GT1
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
321 bcin_chr_13|CGC6 34890.98 4.2804
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_BcinereaB05-10 12073 332648 366 11707
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in Bcin13g03350.1:RNA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH12 139 272 5.4e-22 0.8269230769230769

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396303 Glyco_hydro_12 5.33e-09 46 258 1 188
Glycosyl hydrolase family 12.
235746 PRK06215 5.34e-05 36 263 42 223
hypothetical protein; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.60e-237 1 321 1 321
3.60e-237 1 321 1 321
4.78e-182 1 319 18 336
8.99e-159 17 319 3 306
2.16e-36 17 299 11 289

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.49e-18 16 258 2 216
CRYSTAL STRUCTURE 4Ac Endoglucanase-like protein from Acremonium chrysogenum [Acremonium chrysogenum ATCC 11550],5M2D_B CRYSTAL STRUCTURE 4Ac Endoglucanase-like protein from Acremonium chrysogenum [Acremonium chrysogenum ATCC 11550]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.46e-19 19 277 9 240
Probable xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=xgeA PE=3 SV=1
1.73e-18 19 277 9 240
Xyloglucan-specific endo-beta-1,4-glucanase A OS=Aspergillus niger OX=5061 GN=xgeA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000331 0.999628 CS pos: 26-27. Pr: 0.9667

TMHMM  Annotations      help

There is no transmembrane helices in Bcin13g03350.1:RNA-p1.