CAZyme Information: Bcin12g03130.1:RNA-p1

Basic Information

• Species: Botrytis cinerea
• Lineage: Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea
• CAZyme ID: Bcin12g03130.1:RNA-p1
• CAZy Family: GH78
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
965		102857.03	4.6717

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_BcinereaB05-10	12073	332648	366	11707

• Gene Location: location=bcin_chr_12:1064444-1067691(+)

Full Sequence      

MGFYILSSIFLTFQLSELASSIRLGHRDLNADFLPCYDYIIAGGGISGLVLANRLSEDPE
VAVLVVEAGNLDNDEDFIKYPFEDGEGLGSNYDWNLWTAPQTSLDGSSRPMDLGKGVGGG
SLINGMCWTRGGSADYDAWVALGNPGWGWNDLLPYFKRTEKYTNDVDAAFAHELYIYPDA
STHGTTGYIDVSYPNYFYPQSKLFLDGLRELGIPTLLDPNNGTTAGGMLIPNNLSPDSQT
RSDARRGYYDGFNNRPNLHIATGLVVIRVLMGSAPSEVLARNLPAGQWISGIQIAPSLST
VVREISCSREVILAAGSIHTPQILELSGIGQPYILEQLGLPVHINLPGVGENFQDHPYVG
AVYYYTNSNYRTIAQIDNDAQLLTQAEQEYYVNKTGPWTAGAINTVAFPSLSQITSNWAN
MLTDAENQGVADYLVPGLDASVLSGYDAQKDLIVKLLSRSDVSAYELLNDNVGLMSVAAM
HPLSRGSVHITTDNPYVPPDIDPRYCSNPLDLQILTEALMFNNKIVNTDSMKLLQPRPYY
PFLPNATPKTLIPAIESGLRTEFHGSGSTAMMPREMGGVVDPDLRVYGTKNLRIVDAGII
PMLPASHLQAPVYAIAEKAADTIKRDNYGLSPQGCGKGSSFARPGPVLSNLSINSLKLSA
SNPPPSATTPQVVKPSPSSPPSTLSSLQILSPPAGFLVPGPQVENISTPPIPNLGSPVLS
ASAVFPVLQGWNDSSHSLAHDMGKTVVGTPVRNSIAQSTAMTPSVGVDIGSPTLRNGFDS
AFVSSLVPTVHVAPLRTPDTKTSATTSIVPTSNLQSKSTSQLSSSSERTQSTIMSQGNPT
LTAPVVAASASSLPLLPPATVQNTQTAIQFEASQTSKPFTTSQNALADVAAVFGAKFEQV
ASTLVTIPVADTNTQGPTITSPVSVLDILPATPLMFKTLESSNFHSVASMLEVKYATVST
EPLGG

Enzyme Prediction     

No EC number prediction in Bcin12g03130.1:RNA-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA3	37	626	1.3e-174	0.9947183098591549

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
225186	BetA	1.79e-87	35	627	6	537	Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000	PRK02106	2.69e-84	37	624	6	532	choline dehydrogenase; Validated
398739	GMC_oxred_C	4.52e-33	482	619	1	143	GMC oxidoreductase. This domain found associated with pfam00732.
366272	GMC_oxred_N	2.54e-31	102	357	12	217	GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420	PLN02785	2.76e-06	37	357	56	328	Protein HOTHEAD

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ATZ55747.1|AA3_2	0.0	1	965	1	965
APA13089.1|AA3_2	0.0	1	961	1	957
QSZ30071.1|AA3_2	0.0	1	963	1	961
VBB73951.1|AA3_2	2.62e-174	34	646	34	645
UPK94759.1|AA3_2	1.62e-169	37	624	37	606

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6ZE2_A	3.12e-110	37	627	6	586	Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE2_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE3_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE4_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE4_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE5_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE5_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE6_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE6_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE7_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE7_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],7AA2_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],7AA2_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495]
4YNT_A	4.72e-83	37	626	6	567	Crystal structure of Aspergillus flavus FAD glucose dehydrogenase [Aspergillus flavus NRRL3357],4YNU_A Crystal structure of Aspergillus flavus FADGDH in complex with D-glucono-1,5-lactone [Aspergillus flavus NRRL3357]
6O9N_A	3.90e-70	37	623	36	638	Structural insights on a new fungal aryl-alcohol oxidase [Thermothelomyces thermophilus],6O9N_B Structural insights on a new fungal aryl-alcohol oxidase [Thermothelomyces thermophilus]
6XUT_A	1.76e-67	37	624	17	588	Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina],6XUU_A Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina],6XUV_A Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina]
4H7U_A	1.08e-66	37	625	41	599	Crystal structure of pyranose dehydrogenase from Agaricus meleagris, wildtype [Leucoagaricus meleagris]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q5AUN2|XPTC_EMENI	3.49e-96	37	627	38	617	Dehydrogenase xptC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=xptC PE=3 SV=1
sp|M5EAX2|GMCH_MALS4	5.97e-85	37	623	47	615	GMC oxidoreductase family protein Mala s 12 OS=Malassezia sympodialis (strain ATCC 42132) OX=1230383 GN=MSY001_2108 PE=1 SV=1
sp|Q5GMY3|GMCH_MALSM	5.97e-85	37	623	47	615	GMC oxidoreductase family protein Mala s 12.0101 OS=Malassezia sympodialis OX=76777 PE=1 SV=2
sp|A0A2H3D1U1|ARMD5_ARMGA	7.01e-77	38	626	41	632	Dehydrogenase ARMGADRAFT_1018426 OS=Armillaria gallica OX=47427 GN=ARMGADRAFT_1018426 PE=1 SV=1
sp|Q5B8A1|PKFF_EMENI	2.26e-68	37	627	41	611	Dehydrogenase pkfF OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pkfF PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.286037	0.713960	CS pos: 21-22. Pr: 0.6044

TMHMM  Annotations     

There is no transmembrane helices in Bcin12g03130.1:RNA-p1.