logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: Bcin12g00950.1:RNA-p1

You are here: Home > Sequence: Bcin12g00950.1:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Botrytis cinerea
Lineage Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea
CAZyme ID Bcin12g00950.1:RNA-p1
CAZy Family GH72|CBM43
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
396 bcin_chr_12|CGC3 43311.41 5.8959
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_BcinereaB05-10 12073 332648 366 11707
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.78:33

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 74 355 6.7e-87 0.9930795847750865

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
226444 COG3934 8.46e-25 124 355 59 278
Endo-1,4-beta-mannosidase [Carbohydrate transport and metabolism].
395098 Cellulase 1.25e-09 80 325 30 238
Cellulase (glycosyl hydrolase family 5).
225344 BglC 3.45e-06 21 367 26 351
Aryl-phospho-beta-D-glucosidase BglC, GH1 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.80e-304 1 396 1 396
7.80e-304 1 396 1 396
5.87e-274 1 396 1 396
3.05e-263 1 396 1 396
2.25e-183 4 394 6 396

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.06e-128 45 392 7 344
Chain A, ENDO-1,4-B-D-MANNANASE [Trichoderma reesei],1QNP_A Chain A, Endo-1,4-b-d-mannanase [Trichoderma reesei],1QNQ_A Chain A, Endo-1,4-b-d-mannanase [Trichoderma reesei],1QNR_A Chain A, Endo-1,4-b-d-mannanase [Trichoderma reesei],1QNS_A Chain A, Endo-1,4-b-d-mannanase [Trichoderma reesei]
2.56e-116 50 385 11 336
Crtstal structure of glycoside hydrolase family 5 beta-mannanase from Talaromyces trachyspermus [Talaromyces trachyspermus]
2.29e-115 43 391 3 342
The ligand-free structure of ManBK from Aspergillus niger BK01 [Aspergillus niger],3WH9_B The ligand-free structure of ManBK from Aspergillus niger BK01 [Aspergillus niger]
1.06e-109 39 392 12 355
Chain A, Gh5 Endo-beta-1,4-mannanase [Podospora anserina]
4.84e-74 47 393 11 383
The Crystal Structure of Chrysonilia sitophila endo-beta-D-1,4- mannanase [Neurospora sitophila]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.13e-144 43 396 35 384
Mannan endo-1,4-beta-mannosidase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=manB PE=1 SV=2
1.05e-127 33 392 22 371
Mannan endo-1,4-beta-mannosidase A OS=Hypocrea jecorina (strain ATCC 56765 / BCRC 32924 / NRRL 11460 / Rut C-30) OX=1344414 GN=man1 PE=1 SV=1
2.18e-125 45 392 35 373
Mannan endo-1,4-beta-mannosidase A OS=Aspergillus aculeatus OX=5053 GN=manA PE=1 SV=1
1.33e-118 14 395 18 386
Probable mannan endo-1,4-beta-mannosidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=manA PE=3 SV=1
3.05e-117 14 394 18 385
Probable mannan endo-1,4-beta-mannosidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=manA PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000301 0.999685 CS pos: 23-24. Pr: 0.7722

TMHMM  Annotations      help

There is no transmembrane helices in Bcin12g00950.1:RNA-p1.