logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: Bcin11g00210.1:RNA-p1

You are here: Home > Sequence: Bcin11g00210.1:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Botrytis cinerea
Lineage Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea
CAZyme ID Bcin11g00210.1:RNA-p1
CAZy Family GH7
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
594 65231.95 6.1704
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_BcinereaB05-10 12073 332648 366 11707
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in Bcin11g00210.1:RNA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 8 568 9.7e-152 0.9947183098591549

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
235000 PRK02106 6.51e-103 9 593 6 557
choline dehydrogenase; Validated
225186 BetA 9.36e-94 2 569 1 536
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
274888 Rv0697 6.37e-64 10 564 2 484
dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function.
398739 GMC_oxred_C 7.54e-43 421 562 1 143
GMC oxidoreductase. This domain found associated with pfam00732.
215420 PLN02785 4.78e-36 2 569 49 579
Protein HOTHEAD

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 594 1 594
0.0 1 574 1 574
0.0 1 581 1 596
1.23e-174 9 572 5 541
1.15e-163 4 574 2 570

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.78e-57 8 564 1 559
Crystal structure of aryl-alcohol oxidase from Pleurotus eryngii in complex with p-anisic acid [Pleurotus eryngii]
6.68e-57 8 564 2 560
Crystal structure of aryl-alcohol-oxidase from Pleurotus eryingii [Pleurotus eryngii]
1.71e-55 8 570 40 601
Crystal structure of pyranose dehydrogenase from Agaricus meleagris, wildtype [Leucoagaricus meleagris]
3.04e-49 9 578 8 572
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
1.50e-48 9 578 8 572
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.36e-67 6 563 49 621
Patulin synthase OS=Penicillium expansum OX=27334 GN=patE PE=1 SV=1
4.60e-66 6 563 48 621
Patulin synthase OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=patE PE=1 SV=1
4.88e-63 10 567 4 526
Oxygen-dependent choline dehydrogenase OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=betA PE=3 SV=2
9.19e-63 8 569 45 596
Cyclase atC OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=atC PE=1 SV=1
6.85e-62 10 572 4 531
Oxygen-dependent choline dehydrogenase OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999988 0.000029

TMHMM  Annotations      help

There is no transmembrane helices in Bcin11g00210.1:RNA-p1.