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CAZyme Information: Bcin10g06130.1:RNA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Botrytis cinerea | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea | |||||||||||
| CAZyme ID | Bcin10g06130.1:RNA-p1 | |||||||||||
| CAZy Family | GH65 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 62 | 412 | 1.5e-50 | 0.9384615384615385 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 215426 | PLN02793 | 4.25e-25 | 120 | 392 | 136 | 390 | Probable polygalacturonase |
| 177865 | PLN02218 | 5.64e-23 | 42 | 392 | 82 | 404 | polygalacturonase ADPG |
| 395231 | Glyco_hydro_28 | 2.34e-22 | 122 | 393 | 48 | 300 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215120 | PLN02188 | 2.12e-18 | 36 | 392 | 44 | 370 | polygalacturonase/glycoside hydrolase family protein |
| 178580 | PLN03003 | 2.78e-18 | 133 | 395 | 119 | 356 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 432 | 1 | 432 | |
| 9.01e-278 | 1 | 432 | 1 | 432 | |
| 1.56e-267 | 7 | 432 | 9 | 434 | |
| 2.03e-218 | 47 | 432 | 16 | 401 | |
| 2.21e-148 | 15 | 424 | 14 | 411 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.58e-06 | 217 | 413 | 177 | 352 | Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.91e-130 | 42 | 424 | 45 | 417 | Alpha-L-rhamnosidase rgxB OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxB PE=2 SV=2 |
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| 4.08e-76 | 18 | 422 | 16 | 436 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger OX=5061 GN=rgxA PE=2 SV=1 |
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| 1.14e-75 | 8 | 422 | 5 | 436 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxA PE=2 SV=2 |
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| 3.13e-71 | 27 | 395 | 26 | 411 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rgxA PE=3 SV=2 |
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| 3.13e-71 | 27 | 395 | 26 | 411 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rgxA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000303 | 0.999682 | CS pos: 18-19. Pr: 0.9659 |