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CAZyme Information: Bcin10g00570.1:RNA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Botrytis cinerea | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea | |||||||||||
| CAZyme ID | Bcin10g00570.1:RNA-p1 | |||||||||||
| CAZy Family | GH51 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 222 | 738 | 9.7e-70 | 0.9635036496350365 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 366272 | GMC_oxred_N | 6.84e-63 | 273 | 499 | 4 | 218 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| 225186 | BetA | 1.73e-37 | 221 | 741 | 6 | 536 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 398739 | GMC_oxred_C | 2.17e-26 | 589 | 730 | 14 | 139 | GMC oxidoreductase. This domain found associated with pfam00732. |
| 235241 | PRK04176 | 6.58e-07 | 220 | 256 | 23 | 59 | ribulose-1,5-biphosphate synthetase; Provisional |
| 235000 | PRK02106 | 9.87e-07 | 679 | 737 | 473 | 533 | choline dehydrogenase; Validated |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.12e-242 | 5 | 742 | 1 | 734 | |
| 7.20e-12 | 224 | 741 | 16 | 532 | |
| 9.51e-12 | 224 | 751 | 16 | 542 | |
| 2.90e-11 | 224 | 741 | 16 | 532 | |
| 3.38e-11 | 224 | 741 | 105 | 621 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.65e-08 | 224 | 723 | 231 | 748 | Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.87e-92 | 100 | 731 | 42 | 711 | Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana OX=3702 GN=FAO4A PE=3 SV=2 |
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| 1.76e-85 | 82 | 742 | 59 | 746 | Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus OX=34305 GN=FAO2 PE=2 SV=1 |
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| 1.22e-84 | 78 | 745 | 44 | 745 | Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana OX=3702 GN=FAO4B PE=2 SV=2 |
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| 1.25e-84 | 80 | 738 | 55 | 740 | Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus OX=34305 GN=FAO1 PE=1 SV=1 |
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| 8.45e-83 | 82 | 742 | 52 | 740 | Long-chain-alcohol oxidase FAO3 OS=Arabidopsis thaliana OX=3702 GN=FAO3 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000053 | 0.000000 |