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CAZyme Information: Bcin08g02120.1:RNA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Botrytis cinerea | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea | |||||||||||
| CAZyme ID | Bcin08g02120.1:RNA-p1 | |||||||||||
| CAZy Family | GH3 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.22:2 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH27 | 141 | 386 | 2.4e-69 | 0.9650655021834061 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 269893 | GH27 | 2.86e-116 | 40 | 322 | 1 | 271 | glycosyl hydrolase family 27 (GH27). GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively. |
| 166449 | PLN02808 | 2.98e-110 | 32 | 403 | 24 | 376 | alpha-galactosidase |
| 177874 | PLN02229 | 1.64e-106 | 12 | 431 | 32 | 427 | alpha-galactosidase |
| 178295 | PLN02692 | 6.99e-98 | 32 | 407 | 48 | 405 | alpha-galactosidase |
| 374582 | Melibiase_2 | 9.63e-65 | 39 | 322 | 1 | 284 | Alpha galactosidase A. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 666 | 1 | 666 | |
| 0.0 | 1 | 666 | 1 | 666 | |
| 1.29e-313 | 192 | 666 | 1 | 475 | |
| 1.16e-240 | 27 | 664 | 20 | 659 | |
| 2.15e-232 | 27 | 664 | 19 | 656 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.73e-92 | 34 | 388 | 3 | 338 | Chain A, alpha-galactosidase [Oryza sativa] |
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| 4.00e-84 | 32 | 403 | 1 | 353 | Nicotiana benthamiana alpha-galactosidase [Nicotiana benthamiana] |
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| 2.02e-79 | 33 | 409 | 2 | 389 | Crystal structure of alpha-galactosidase I from Mortierella vinacea [Umbelopsis vinacea] |
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| 8.19e-63 | 34 | 401 | 24 | 402 | Chain A, Alpha-galactosidase 1 [Saccharomyces cerevisiae],3LRL_A Chain A, Alpha-galactosidase 1 [Saccharomyces cerevisiae] |
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| 1.14e-61 | 34 | 401 | 24 | 402 | Chain A, Alpha-galactosidase 1 [Saccharomyces cerevisiae],3LRM_B Chain B, Alpha-galactosidase 1 [Saccharomyces cerevisiae],3LRM_C Chain C, Alpha-galactosidase 1 [Saccharomyces cerevisiae],3LRM_D Chain D, Alpha-galactosidase 1 [Saccharomyces cerevisiae] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.14e-243 | 11 | 664 | 5 | 658 | Probable alpha-galactosidase D OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=aglD PE=3 SV=2 |
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| 1.50e-235 | 13 | 664 | 4 | 646 | Probable alpha-galactosidase D OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=aglD PE=3 SV=2 |
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| 1.50e-235 | 13 | 664 | 4 | 646 | Probable alpha-galactosidase D OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=aglD PE=3 SV=2 |
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| 1.30e-231 | 11 | 664 | 6 | 646 | Probable alpha-galactosidase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=aglD PE=3 SV=1 |
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| 4.67e-229 | 27 | 664 | 19 | 656 | Probable alpha-galactosidase D OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=aglD PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000245 | 0.999731 | CS pos: 23-24. Pr: 0.9801 |