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CAZyme Information: Bcin07g03980.1:RNA-p1

You are here: Home > Sequence: Bcin07g03980.1:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Botrytis cinerea
Lineage Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea
CAZyme ID Bcin07g03980.1:RNA-p1
CAZy Family GH28
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
412 41158.81 5.2383
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_BcinereaB05-10 12073 332648 366 11707
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.14.99.53:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA11 19 224 2.6e-78 0.9842931937172775

CDD Domains      help

Bcin07g03980.1:RNA-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.14e-254 1 412 1 412
5.10e-244 1 412 1 412
7.32e-184 1 411 1 425
1.77e-158 1 400 1 417
2.39e-91 12 403 11 386

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.12e-70 19 220 1 201
Structure of Aspergillus oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn [Aspergillus oryzae],4MAI_A Structure of Aspergillus oryzae AA11 Lytic Polysaccharide Monooxygenase with Cu(I) [Aspergillus oryzae]

Swiss-Prot Hits      help

Bcin07g03980.1:RNA-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000457 0.999536 CS pos: 18-19. Pr: 0.9642

TMHMM  Annotations      help

There is no transmembrane helices in Bcin07g03980.1:RNA-p1.