CAZyme Information: Bcin06g04840.1:RNA-p1

Basic Information

• Species: Botrytis cinerea
• Lineage: Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea
• CAZyme ID: Bcin06g04840.1:RNA-p1
• CAZy Family: GH16
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
777	bcin_chr_6|CGC4	83642.96	4.4565

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_BcinereaB05-10	12073	332648	366	11707

• Gene Location: location=bcin_chr_6:1641784-1644312(-)

Full Sequence      

MKVPSASVAALLAYTANATYTNSTPVYKDPNASVDDRVADLLSRMTIQDKTSQLIQGDIS
NWRNMTDGTFNATGLAWNMATRAGQFYVGYPVAQQLIADGIKQAQDYLMHNTTLGIPALV
QSEGIHGFLIGNATIFNSPIAQACSWNPALIKRMGAAIAQESLALGVNQIFGPLGDLARE
LRYGRVEETFGEDGYLAGELGYAYVKGLQAGNVSSTVKHFAAFGTPEQGLNTGPQHGGER
ELRTTYLPPYKRMIMDADAWSIMSAYHSYDGVALIASYHILTEILREEWGYKYWVTSDAG
ATDRLCDAFKMCRSKGNGLPIDSDAVTMFALPAGNDVEMGGGSFNFQKIPELVESGVLDI
DIVDTAVSRLLRAKFVQGLFENPYLAAPADETASLIHTQEHIDLARELDAESIVLLENGK
GVLPLSKTANVAVIGPMAHGFMNYGDYVVNGSMYHGVTPLDGIQAASSGSITYAQGCERW
SNDQSGFEEAISVAQAADVAVVVVGTWSRDQNQLWQGLNATTGEHVDVSSLNLVGAMPHL
VKAIIDTGKPTVVVFSSGKPITEAWISANASALVQQFYPSEQGGNALADVLFGDVNPSGK
LSVGFPYDVGTTPIYYDYWNSGRPNYPGEAFPNGTLSFGHQYVLSSPMPLYEFGYGKSYS
TFEYSDVTLSATNVTANDTITATVSVTNNSTRDGAEVVQLYVQDVISSVVVPNIQLKGFS
KVSIKAGETETVNIDLKVEDVGLWDIRMKYVVEPGDFVVQIGSSSADLRANATFTVI

Enzyme Prediction     

EC	3.2.1.120:1	3.2.1.21:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	110	339	1.3e-60	0.9814814814814815

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
185053	PRK15098	3.57e-154	1	775	2	763	beta-glucosidase BglX.
224389	BglX	8.25e-71	103	466	47	386	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
178629	PLN03080	1.21e-61	114	734	79	740	Probable beta-xylosidase; Provisional
395747	Glyco_hydro_3	2.25e-51	33	373	1	316	Glycosyl hydrolase family 3 N terminal domain.
396478	Glyco_hydro_3_C	3.09e-46	413	659	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CCD56845.1|GH3	0.0	1	777	1	777
ATZ51038.1|GH3	0.0	1	777	1	777
APA15785.1|GH3	0.0	1	777	1	777
QSZ32114.1|GH3	0.0	1	776	1	776
CBX93517.1|GH3	0.0	16	777	127	882

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7EAP_A	0.0	25	776	5	756	Chain A, Fn3_like domain-containing protein [Aspergillus oryzae RIB40]
5YOT_A	0.0	25	776	5	756	Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YOT_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_A Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40]
5TF0_A	1.18e-112	36	769	10	744	Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393]
5Z87_A	1.22e-108	3	769	12	778	Chain A, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus]
5XXL_A	2.82e-106	36	776	11	751	Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|T2KMH0|PLH24_FORAG	1.65e-116	92	776	41	722	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
sp|Q56078|BGLX_SALTY	2.00e-114	35	769	35	758	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
sp|P33363|BGLX_ECOLI	3.32e-111	35	769	35	758	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
sp|T2KMH9|PLH34_FORAG	2.66e-95	14	769	17	748	Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1
sp|P14002|BGLB_ACET2	2.16e-84	114	776	35	674	Thermostable beta-glucosidase B OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=bglB PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
0.551799	0.448201

TMHMM  Annotations     

There is no transmembrane helices in Bcin06g04840.1:RNA-p1.