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CAZyme Information: Bcin05g06830.1:RNA-p1

You are here: Home > Sequence: Bcin05g06830.1:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Botrytis cinerea
Lineage Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea
CAZyme ID Bcin05g06830.1:RNA-p1
CAZy Family GH128
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
297 bcin_chr_5|CGC10 29570.54 3.9311
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_BcinereaB05-10 12073 332648 366 11707
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in Bcin05g06830.1:RNA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA16 20 188 1.4e-61 0.9940119760479041

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397269 LPMO_10 6.52e-04 94 188 90 186
Lytic polysaccharide mono-oxygenase, cellulose-degrading. This domain is found associated with a wide variety of cellulose binding domains. This is a family of two very closely related proteins that together act as both a C1- and a C4-oxidising lytic polysaccharide mono-oxygenase, degrading cellulose. This domain is also found in baculoviral spheroidins and spindolins, protein of unknown function.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.71e-162 1 297 1 297
8.71e-162 1 297 1 297
2.26e-104 1 297 1 294
3.39e-96 1 194 1 195
2.05e-80 1 191 1 192

PDB Hits      help

Bcin05g06830.1:RNA-p1 has no PDB hit.

Swiss-Prot Hits      help

Bcin05g06830.1:RNA-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000274 0.999696 CS pos: 19-20. Pr: 0.9803

TMHMM  Annotations      help

There is no transmembrane helices in Bcin05g06830.1:RNA-p1.