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CAZyme Information: Bcin04g05660.1:RNA-p1
You are here: Home > Sequence: Bcin04g05660.1:RNA-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Botrytis cinerea | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea | |||||||||||
| CAZyme ID | Bcin04g05660.1:RNA-p1 | |||||||||||
| CAZy Family | GT8 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 227350 | COG5017 | 9.72e-18 | 13 | 164 | 2 | 133 | UDP-N-acetylglucosamine transferase subunit ALG13 [Carbohydrate transport and metabolism]. |
| 397977 | Glyco_tran_28_C | 1.36e-14 | 12 | 168 | 1 | 142 | Glycosyltransferase family 28 C-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site. |
| 223779 | MurG | 2.95e-07 | 104 | 151 | 255 | 302 | UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell wall/membrane/envelope biogenesis]. |
| 340818 | GT28_MurG | 2.38e-06 | 104 | 149 | 255 | 300 | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. MurG (EC 2.4.1.227) is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| 340817 | GT1_Gtf-like | 2.47e-06 | 103 | 173 | 309 | 382 | UDP-glycosyltransferases and similar proteins. This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.58e-152 | 1 | 213 | 1 | 213 | |
| 1.58e-152 | 1 | 213 | 1 | 213 | |
| 7.32e-117 | 1 | 213 | 1 | 213 | |
| 4.92e-115 | 5 | 213 | 5 | 213 | |
| 1.22e-37 | 11 | 213 | 8 | 194 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 9.48e-21 | 11 | 170 | 6 | 179 | NMR solution structure of ALG13 --- obtained with iterative CS-Rosetta from backbone NMR data. [Saccharomyces cerevisiae] |
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| 1.09e-20 | 2 | 170 | 13 | 202 | NMR solution structure of ALG13: The sugar donor subunit of a yeast N-acetylglucosamine transferase. Northeast Structural Genomics Consortium target YG1 [Saccharomyces cerevisiae] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 9.12e-32 | 11 | 167 | 5 | 162 | UDP-N-acetylglucosamine transferase subunit alg13 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=alg13 PE=3 SV=2 |
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| 4.98e-20 | 11 | 170 | 7 | 180 | UDP-N-acetylglucosamine transferase subunit ALG13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ALG13 PE=1 SV=1 |
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| 3.60e-18 | 13 | 167 | 3 | 173 | UDP-N-acetylglucosamine transferase subunit ALG13 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=ALG13 PE=3 SV=1 |
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| 1.36e-16 | 12 | 150 | 29 | 151 | UDP-N-acetylglucosamine transferase subunit ALG13 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=ALG13 PE=3 SV=1 |
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| 2.02e-15 | 11 | 150 | 2 | 122 | UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Rattus norvegicus OX=10116 GN=Alg13 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000077 | 0.000001 |