logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: Bcin03g01440.1:RNA-p1

You are here: Home > Sequence: Bcin03g01440.1:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Botrytis cinerea
Lineage Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea
CAZyme ID Bcin03g01440.1:RNA-p1
CAZy Family CBM35|GH26
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
444 47032.27 5.5263
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_BcinereaB05-10 12073 332648 366 11707
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.78:33

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 133 404 5.9e-80 0.9930795847750865

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
226444 COG3934 9.50e-33 108 422 3 293
Endo-1,4-beta-mannosidase [Carbohydrate transport and metabolism].
395098 Cellulase 4.45e-13 153 378 36 238
Cellulase (glycosyl hydrolase family 5).
395595 CBM_1 5.17e-11 22 50 1 29
Fungal cellulose binding domain.
197593 fCBD 9.98e-11 21 53 1 33
Fungal-type cellulose-binding domain. Small four-cysteine cellulose-binding domain of fungi

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.69e-308 1 444 1 444
7.69e-308 1 444 1 444
1.87e-275 1 444 1 440
1.43e-261 1 444 1 448
1.38e-186 1 443 1 432

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.54e-138 101 440 2 344
The ligand-free structure of ManBK from Aspergillus niger BK01 [Aspergillus niger],3WH9_B The ligand-free structure of ManBK from Aspergillus niger BK01 [Aspergillus niger]
1.66e-137 101 439 4 344
Chain A, ENDO-1,4-B-D-MANNANASE [Trichoderma reesei],1QNP_A Chain A, Endo-1,4-b-d-mannanase [Trichoderma reesei],1QNQ_A Chain A, Endo-1,4-b-d-mannanase [Trichoderma reesei],1QNR_A Chain A, Endo-1,4-b-d-mannanase [Trichoderma reesei],1QNS_A Chain A, Endo-1,4-b-d-mannanase [Trichoderma reesei]
1.81e-128 102 440 16 356
Chain A, Gh5 Endo-beta-1,4-mannanase [Podospora anserina]
3.05e-127 104 438 6 342
Crtstal structure of glycoside hydrolase family 5 beta-mannanase from Talaromyces trachyspermus [Talaromyces trachyspermus]
1.61e-74 101 441 4 359
Crystal Structure Analysis of the Endo-1,4-beta-mannanase from Rhizomucor miehei [Rhizomucor miehei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.59e-150 19 441 18 433
Probable mannan endo-1,4-beta-mannosidase F OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=manF PE=3 SV=2
1.41e-145 4 434 6 432
Mannan endo-1,4-beta-mannosidase F OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=manF PE=3 SV=1
2.02e-143 101 441 32 375
Mannan endo-1,4-beta-mannosidase A OS=Aspergillus aculeatus OX=5053 GN=manA PE=1 SV=1
6.33e-140 101 442 41 385
Probable mannan endo-1,4-beta-mannosidase A-1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=manA-1 PE=3 SV=1
1.00e-137 12 436 12 454
Probable mannan endo-1,4-beta-mannosidase F OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=manF PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000253 0.999702 CS pos: 18-19. Pr: 0.9772

TMHMM  Annotations      help

There is no transmembrane helices in Bcin03g01440.1:RNA-p1.