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CAZyme Information: Bcin02g01640.1:RNA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Botrytis cinerea | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea | |||||||||||
| CAZyme ID | Bcin02g01640.1:RNA-p1 | |||||||||||
| CAZy Family | AA7 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH27 | 159 | 420 | 2.2e-70 | 0.982532751091703 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 269893 | GH27 | 6.68e-127 | 63 | 350 | 1 | 271 | glycosyl hydrolase family 27 (GH27). GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively. |
| 166449 | PLN02808 | 8.57e-106 | 55 | 418 | 24 | 359 | alpha-galactosidase |
| 177874 | PLN02229 | 1.45e-97 | 55 | 420 | 55 | 394 | alpha-galactosidase |
| 178295 | PLN02692 | 1.19e-95 | 55 | 419 | 48 | 384 | alpha-galactosidase |
| 374582 | Melibiase_2 | 2.36e-73 | 62 | 350 | 1 | 284 | Alpha galactosidase A. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 454 | 1 | 454 | |
| 0.0 | 1 | 454 | 1 | 454 | |
| 1.00e-295 | 13 | 454 | 18 | 466 | |
| 6.30e-263 | 65 | 454 | 1 | 385 | |
| 3.02e-200 | 53 | 442 | 44 | 430 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 9.42e-92 | 55 | 388 | 92 | 420 | Crystal structure of a putative alpha-galactosidase/melibiase (BF4189) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution [Bacteroides fragilis NCTC 9343],4OGZ_B Crystal structure of a putative alpha-galactosidase/melibiase (BF4189) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution [Bacteroides fragilis NCTC 9343] |
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| 6.50e-90 | 55 | 438 | 92 | 470 | Crystal structure of a putative alpha-galactosidase (BF1418) from Bacteroides fragilis NCTC 9343 at 1.57 A resolution [Bacteroides fragilis NCTC 9343] |
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| 3.70e-83 | 55 | 438 | 1 | 356 | Chain A, alpha-galactosidase [Oryza sativa] |
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| 2.00e-79 | 56 | 440 | 2 | 389 | Crystal structure of alpha-galactosidase I from Mortierella vinacea [Umbelopsis vinacea] |
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| 5.03e-77 | 55 | 418 | 1 | 336 | Nicotiana benthamiana alpha-galactosidase [Nicotiana benthamiana] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.06e-91 | 59 | 441 | 29 | 401 | Alpha-galactosidase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=agaA PE=1 SV=1 |
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| 1.24e-90 | 57 | 438 | 50 | 404 | Alpha-galactosidase OS=Cyamopsis tetragonoloba OX=3832 PE=1 SV=1 |
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| 3.14e-90 | 55 | 438 | 32 | 388 | Alpha-galactosidase 2 OS=Arabidopsis thaliana OX=3702 GN=AGAL2 PE=1 SV=1 |
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| 6.09e-82 | 55 | 420 | 65 | 404 | Alpha-galactosidase 3 OS=Arabidopsis thaliana OX=3702 GN=AGAL3 PE=1 SV=1 |
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| 9.64e-82 | 55 | 438 | 56 | 411 | Alpha-galactosidase OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0493600 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.002446 | 0.997543 | CS pos: 23-24. Pr: 0.9688 |