You are browsing environment: FUNGIDB
Bcin02g00060.1:RNA-p1
Basic Information
help
Species
Botrytis cinerea
Lineage
Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea
CAZyme ID
Bcin02g00060.1:RNA-p1
CAZy Family
AA5
CAZyme Description
unspecified product
CAZyme Property
Protein Length
CGC
Molecular Weight
Isoelectric Point
480
bcin_chr_2|CGC8 53637.82
5.4145
Genome Property
Genome Version/Assembly ID
Genes
Strain NCBI Taxon ID
Non Protein Coding Genes
Protein Coding Genes
FungiDB-61_BcinereaB05-10
12073
332648
366
11707
Gene Location
No EC number prediction in Bcin02g00060.1:RNA-p1.
Family
Start
End
Evalue
family coverage
GH28
163
445
1.9e-38
0.8061538461538461
Cdd ID
Domain
E-Value
qStart
qEnd
sStart
sEnd
Domain Description
395231
Glyco_hydro_28
1.70e-07
188
444
44
305
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
more
227721
Pgu1
6.20e-06
144
306
173
338
Polygalacturonase [Carbohydrate transport and metabolism].
more
178580
PLN03003
0.001
191
336
109
256
Probable polygalacturonase At3g15720
more
Hit ID
E-Value
Query Start
Query End
Hit Start
Hit End
0.0
1
480
1
480
0.0
1
480
1
480
0.0
1
480
1
480
1.13e-241
5
480
6
477
1.01e-202
4
476
3
485
Bcin02g00060.1:RNA-p1 has no PDB hit.
Hit ID
E-Value
Query Start
Query End
Hit Start
Hit End
Description
3.78e-06
165
340
96
275
Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g43860 PE=2 SV=1
more
This protein is predicted as OTHER
Other
SP_Sec_SPI
CS Position
1.000095
0.000002
There is no transmembrane helices in Bcin02g00060.1:RNA-p1.
