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CAZyme Information: Bcin01g11160.1:RNA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Botrytis cinerea | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea | |||||||||||
| CAZyme ID | Bcin01g11160.1:RNA-p1 | |||||||||||
| CAZy Family | AA3 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 58 | 401 | 4.2e-62 | 0.9784615384615385 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 9.55e-41 | 63 | 400 | 1 | 317 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215426 | PLN02793 | 1.17e-28 | 46 | 361 | 62 | 373 | Probable polygalacturonase |
| 177865 | PLN02218 | 1.10e-25 | 46 | 369 | 77 | 392 | polygalacturonase ADPG |
| 215540 | PLN03010 | 5.45e-25 | 46 | 399 | 56 | 390 | polygalacturonase |
| 215120 | PLN02188 | 3.16e-22 | 46 | 358 | 46 | 350 | polygalacturonase/glycoside hydrolase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.10e-293 | 1 | 412 | 1 | 412 | |
| 1.10e-293 | 1 | 412 | 1 | 412 | |
| 1.02e-250 | 5 | 412 | 5 | 412 | |
| 1.03e-213 | 4 | 412 | 4 | 413 | |
| 5.18e-145 | 33 | 412 | 30 | 406 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 9.66e-147 | 33 | 412 | 12 | 388 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
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| 3.86e-28 | 69 | 398 | 34 | 338 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 3.86e-28 | 69 | 398 | 34 | 338 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 8.78e-28 | 69 | 398 | 26 | 330 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.58e-24 | 56 | 328 | 11 | 278 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 9.20e-146 | 33 | 412 | 30 | 406 | Endo-xylogalacturonan hydrolase A OS=Aspergillus tubingensis OX=5068 GN=xghA PE=1 SV=1 |
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| 5.27e-145 | 19 | 412 | 17 | 406 | Probable endo-xylogalacturonan hydrolase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=xghA PE=3 SV=1 |
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| 3.01e-139 | 13 | 412 | 11 | 406 | Probable endo-xylogalacturonan hydrolase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=xghA PE=3 SV=1 |
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| 1.60e-136 | 13 | 412 | 11 | 406 | Probable endo-xylogalacturonan hydrolase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=xghA PE=3 SV=2 |
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| 2.26e-136 | 13 | 412 | 11 | 406 | Probable endo-xylogalacturonan hydrolase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=xghA PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000406 | 0.999552 | CS pos: 20-21. Pr: 0.9798 |