CAZyme Information: Bcin01g09260.1:RNA-p1

Basic Information

• Species: Botrytis cinerea
• Lineage: Ascomycota; Leotiomycetes; ; Sclerotiniaceae; Botrytis; Botrytis cinerea
• CAZyme ID: Bcin01g09260.1:RNA-p1
• CAZy Family: AA3
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1100	bcin_chr_1|CGC2	124799.62	6.3181

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_BcinereaB05-10	12073	332648	366	11707

• Gene Location: location=bcin_chr_1:3218321-3221815(+)

Full Sequence      

MDGAMMDYIPIPSFISKALQGRNQPRNRDVSSKTPNPLSYPKSSLPYDSQLFKNPSSEYR
GCPFWAWNTKLDKGQLLRQIDYFAEMGLGGFHMHVRTGLDTEYMGTEFMDLIRACVDYAE
TKHMLACLYDDDRWPSGAAGGKVIEKYPEHKGKHLLFTPHAYGTVPLGGGAPASARASRS
ENGHLIARFEIELDNNGTLKSSRILEKGEHGENVWYAYVETNPNSSWFNDQTYIDTLSED
AMARFIEMTHEAYKKKCGDKFGTIIPCIFTDEPQFATKIRLPHPRANEDIFLPWTTDLPE
SFKKEYHADIVESLPQVIWNLPNDKPSLPRYRYHDHVCERFVSAFIDQISGWCQKNNLYL
DGHMMEEPTLYSQTTALGEAMRCYRNMDMPGIDLLVDGVEYNTAKQASSVSRQMGRRGTM
CEIYGVTHWYFTFEGHKGCGDWQAALGITFRVHHLAWLSMAGEGKRDYPASINYQSPWYK
EYGYVEDHFARVSVAMTRGKAVTRVGVIHPIESYWLCFGPDQSGDEAGFRDRAFSELTNW
LLHGLIDFDFISESLLPTQVSKPQEGRKLIVGFCEYEVIIVPNLRTIRSSTLNVIQAFSK
AGGRVIIAGSSPELIDAAVPPEKPTIKHSINVFWSQQNILCALNEYRDLRVTNENGSSTE
HLLYQMRQDGNEKYVFICNTDRNSPIMTKIELKGHWDVSKMDTFNGEEGLMSSQLVKDWT
QLHHKFEGCASLLMRLRPRTRQSIAETLPLIKISEKIPVLEGDVTLTKVELSEPNVLMLD
YASYKLDSDEHWSDSTEVLRIDNAIRDRLKLPHKGAAFRQPWSVPASERAPKTHVTMRFL
IISALDGNKSTKLALEDIKGMKIKINRIELDSQNFDGWWVDEDIRTLEIPAYTIRPGRNT
LTLSFPFGILTNIERLYLLGDFCVGNRHNSSLGTDSYYLQQPRTVSWGDITKQGLPFYAG
NLTYICDILIPPTSPTTTVHLSLPEYSSPVLTVALADTKQKLGRIAFQPRTLDITSLGPG
KHKIAITAFGNRYNSFGHVHLPDGLTNGCSPDIWRTGGDWWTDRYNVKPIGILECPSLKS
EMKLVDEVDEGNEEGWELVE

Enzyme Prediction     

No EC number prediction in Bcin01g09260.1:RNA-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	50	741	2.4e-50	0.7864077669902912

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
153237	A4_beta-galactosidase_middle_domain	8.41e-06	505	606	1	84	A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ATZ46302.1|GH106	0.0	1	1100	1	1100
QSZ35257.1|GH106	0.0	6	1100	1	1089
CCD42276.1|GH106	0.0	1	613	1	613
UQC78813.1|GH106	0.0	21	1100	18	1084
AAW43679.2|GH106	0.0	36	1079	4	1043

PDB Hits     

Bcin01g09260.1:RNA-p1 has no PDB hit.

Swiss-Prot Hits     

Bcin01g09260.1:RNA-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000036	0.000000

TMHMM  Annotations     

There is no transmembrane helices in Bcin01g09260.1:RNA-p1.