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CAZyme Information: An07g01000-T-p1

You are here: Home > Sequence: An07g01000-T-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus niger
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus niger
CAZyme ID An07g01000-T-p1
CAZy Family GH16
CAZyme Description Has domain(s) with predicted polygalacturonase activity and role in carbohydrate metabolic process
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
474 An07_A_niger_CBS_513_88|CGC5 51654.32 4.2223
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AnigerCBS513-88 14403 425011 346 14057
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in An07g01000-T-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 69 365 1.4e-46 0.9230769230769231

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 1.93e-25 69 357 6 303
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215540 PLN03010 3.85e-17 38 379 48 396
polygalacturonase
177865 PLN02218 1.64e-16 38 329 69 383
polygalacturonase ADPG
178580 PLN03003 7.37e-15 38 327 25 330
Probable polygalacturonase At3g15720
215426 PLN02793 4.37e-14 153 329 187 369
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 474 1 474
0.0 1 474 1 455
0.0 1 474 1 455
3.12e-266 15 474 14 489
7.90e-257 1 474 1 487

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.71e-86 19 413 1 384
Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus]
3.80e-07 143 331 151 345
Chain A, POLYGALACTURONASE [Pectobacterium carotovorum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.16e-90 15 413 15 403
Probable rhamnogalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgA PE=3 SV=1
2.32e-90 15 451 14 449
Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rhgA PE=2 SV=2
6.45e-90 15 413 15 403
Rhamnogalacturonase A OS=Aspergillus niger OX=5061 GN=rhgA PE=1 SV=1
9.37e-88 1 413 1 402
Rhamnogalacturonase A OS=Aspergillus aculeatus OX=5053 GN=rhgA PE=1 SV=1
3.75e-86 18 413 21 409
Probable rhamnogalacturonase E OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgE PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000232 0.999738 CS pos: 18-19. Pr: 0.9725

TMHMM  Annotations      help

There is no transmembrane helices in An07g01000-T-p1.