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CAZyme Information: An05g02440-T-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Aspergillus niger | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus niger | |||||||||||
| CAZyme ID | An05g02440-T-p1 | |||||||||||
| CAZy Family | GH13 | |||||||||||
| CAZyme Description | Putative polygalacturonase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:80 |
|---|
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 4.82e-124 | 63 | 382 | 1 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 227721 | Pgu1 | 2.47e-23 | 99 | 384 | 183 | 524 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 178580 | PLN03003 | 9.25e-22 | 120 | 376 | 118 | 375 | Probable polygalacturonase At3g15720 |
| 177865 | PLN02218 | 1.61e-21 | 114 | 376 | 157 | 420 | polygalacturonase ADPG |
| 165802 | PLN02155 | 1.59e-16 | 117 | 336 | 120 | 336 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.93e-277 | 1 | 384 | 1 | 384 | |
| 5.45e-275 | 1 | 384 | 1 | 383 | |
| 4.27e-270 | 1 | 384 | 1 | 384 | |
| 3.50e-269 | 1 | 384 | 1 | 384 | |
| 3.50e-269 | 1 | 384 | 1 | 384 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.91e-168 | 42 | 382 | 1 | 339 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
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| 5.97e-152 | 38 | 382 | 5 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 3.43e-151 | 38 | 382 | 5 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 9.87e-149 | 45 | 382 | 3 | 336 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.26e-139 | 44 | 382 | 2 | 336 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.20e-278 | 1 | 384 | 1 | 384 | Probable endopolygalacturonase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaC PE=3 SV=1 |
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| 9.68e-276 | 1 | 384 | 1 | 383 | Probable endopolygalacturonase C OS=Aspergillus niger OX=5061 GN=pgaC PE=3 SV=1 |
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| 1.99e-250 | 1 | 384 | 1 | 384 | Probable endopolygalacturonase C OS=Aspergillus aculeatus OX=5053 GN=pgaC PE=2 SV=1 |
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| 4.69e-199 | 25 | 382 | 23 | 378 | Probable endopolygalacturonase E OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaE PE=3 SV=1 |
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| 3.83e-198 | 25 | 382 | 23 | 378 | Endopolygalacturonase E OS=Aspergillus niger OX=5061 GN=pgaE PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000230 | 0.999745 | CS pos: 19-20. Pr: 0.9821 |