CAZyme Information: Afu4g03350-T-p1

Basic Information

• Species: Aspergillus fumigatus
• Lineage: Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus fumigatus
• CAZyme ID: Afu4g03350-T-p1
• CAZy Family: GH28
• CAZyme Description: Pectate lyase superfamily protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
779		82512.39	5.6721

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AfumigatusAf293	10130	330879	290	9840

• Gene Location: location=Chr4_A_fumigatus_Af293:960149-962538(+)

Full Sequence      

MRGLLLLTTLASTLTSTLATASSAAVGARAPSCSGPVKSSPSTYWLVEQDHIGNPRGYAP
HAGGNYNYPVWRNVLDYGAKNDGSGDQTASLQKAINDNGSGGSRESSGVTRYPAQVYLPS
GTYQLGSTLNLRVGTLIVGDPINPPVIKAVAGFNGNTLVNGYDSKNGPPETSFMTLMKNV
VLDTTALRPDTRITALQWGVAQGAGLTNVQINMPNYSTGHTGIHVQAGSTIAITDVQING
GVVGIDNSNQQVNFKNIHFNGCTTAFRASGGHTALLQGATFENCGVGIDMTSNGLGSLVL
LDSTSVNSGTTIKFHDSSNDGGNRNSQILIENLTHDNGNPIAEDSKGNVKLANTSHVDTW
VWGNVTPGQYETGTSFNTNRPNVLLSGGKFFMKAQPTYAEYASDQIVNVKAVAGHTVKGD
GYTDDSASLNAILADNAASCKISYFPYGVYIVKDTLIIPPGSRIVGEAWSVISGAGNAFK
GARNPKAVVRVGNPGDVGVAEIQDMRFSVSEVLPGAKILEVNMAGSAPGDVGLWNTIVTV
GGTAETSISTGCTNQDTSQCMAAYMVMHLTKSSSAYIENFWGWTADHNLDGGSGYTVIST
GRGVLVESTKGTWLTGTGSEHHWLYNYNFHNAENVYAGLLQTESPYMQSSGATQTAPAPW
TADSSVGDPDFSWCAGGDQKCRTALATNVDGGKDVLLYNSAAWAFFDGEWYGDYGTQCSG
NCQSNMMRVSNNPENLVWYSINTRKTNVMVLDGQSNPTEYYHPGGWEAIIQAYRQFSSH

Enzyme Prediction     

No EC number prediction in Afu4g03350-T-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH55	38	773	3.1e-232	0.9878378378378379

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
403800	Pectate_lyase_3	5.69e-53	71	289	1	213	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
403800	Pectate_lyase_3	2.19e-05	418	477	10	73	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QMW41258.1|GH55	0.0	33	777	64	806
BAE58922.1|GH55	0.0	33	777	64	806
UDD58907.1|GH55	0.0	33	777	64	806
QRD85481.1|GH55	0.0	33	777	64	806
QMW29184.1|GH55	0.0	33	777	64	806

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3EQN_A	5.10e-114	33	773	11	755	Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]
5M5Z_A	7.81e-112	40	755	2	735	Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila],5M60_A Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|P53626|E13B_TRIHA	3.02e-151	42	766	35	750	Glucan endo-1,3-beta-glucosidase BGN13.1 OS=Trichoderma harzianum OX=5544 GN=bgn13.1 PE=1 SV=1
sp|P49426|EXG1_COCCA	4.13e-105	44	728	48	731	Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum OX=5017 GN=EXG1 PE=1 SV=1
sp|D4B0V1|E13B_ARTBC	3.37e-99	42	753	41	852	Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02077 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000416	0.999554	CS pos: 19-20. Pr: 0.9727

TMHMM  Annotations     

There is no transmembrane helices in Afu4g03350-T-p1.