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CAZyme Information: ATY65544.1

You are here: Home > Sequence: ATY65544.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cordyceps militaris
Lineage Ascomycota; Sordariomycetes; ; Cordycipitaceae; Cordyceps; Cordyceps militaris
CAZyme ID ATY65544.1
CAZy Family GT15
CAZyme Description exo-polygalacturonase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
450 49726.02 8.2325
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CmilitarisATCC34164 9362 N/A 75 9287
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in ATY65544.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 134 443 1.3e-61 0.8153846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 1.66e-29 148 441 48 316
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
227721 Pgu1 1.70e-17 159 354 205 398
Polygalacturonase [Carbohydrate transport and metabolism].
215426 PLN02793 2.69e-14 113 421 111 392
Probable polygalacturonase
177865 PLN02218 2.89e-13 29 409 31 395
polygalacturonase ADPG
215120 PLN02188 3.06e-12 159 439 128 389
polygalacturonase/glycoside hydrolase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 450 1 450
8.61e-166 44 448 33 438
4.74e-163 3 450 8 439
1.02e-162 43 450 35 440
6.27e-161 3 450 8 439

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.13e-15 150 448 75 344
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
1.13e-15 150 448 75 344
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
1.44e-15 150 434 71 332
Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus]
1.89e-15 150 448 67 336
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
1.79e-12 150 426 68 334
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.93e-99 58 449 31 416
Alpha-L-rhamnosidase rgxB OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxB PE=2 SV=2
3.39e-58 60 424 31 414
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxA PE=2 SV=2
3.39e-58 60 424 31 414
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger OX=5061 GN=rgxA PE=2 SV=1
5.37e-55 59 423 29 412
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rgxA PE=3 SV=2
5.37e-55 59 423 29 412
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rgxA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000214 0.999751 CS pos: 18-19. Pr: 0.9754

TMHMM  Annotations      help

There is no transmembrane helices in ATY65544.1.