CAZyme Information: ATEG_07607-t26_1-p1

Basic Information

• Species: Aspergillus terreus
• Lineage: Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus terreus
• CAZyme ID: ATEG_07607-t26_1-p1
• CAZy Family: GH55
• CAZyme Description: rhamnogalacturonase A precursor

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
526		55261.21	4.8043

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AterreusNIH2624	10551	341663	150	10401

• Gene Location: location=CH476604:518965-520645(+)

Full Sequence      

MHVNTLSVLSLVGLVPLAAARLSGSVGPLTSASAKAATKTCNVLDYGAAADKTTDLGAPL
ASAFADCKTGGLVYVPPGDYALESWAQLSGGKAWALQIDGTIYRTGTDGGNMIFIEHSSD
FELFSSTSSGAMQGLGYEFHKDDNWSGPRLLRLYDVSDFALHDFILVDSPSFHLSLDTCS
NGEVYNMAIRGGNHGALDGVDVWSTNIWIHDVEVTNKDECVTVKSPAQNILVENIYCNWS
GGCGMGSLGADTNISDITYRNVYTWNSNQMMLIKSNGGSGTVSNVVLENFIGHGNAYSLD
IDSAWSSMSTQSGDGVEFSNFTIRNWKGTEANGAERGPVKIICPNGAPCYEMYIEDFAMW
TEEGDEQWYTCQSAFGSGFCLQSGSDYSSYEATTSTATSAPSGYSAPTMASDLTRDFGST
VSIPIPTIPTSFYPGATPYSALMGAQSSASANVRAVAFGTSAVVSRAGSSSRPAQTGSFL
TKSTTAAAGSIMGPTAAAVQGVCAPPAGQGRGAARYGGHRRHGHRH

Enzyme Prediction     

EC	3.2.1.171:11

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH28	65	374	2.7e-54	0.96

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
395231	Glyco_hydro_28	3.40e-18	148	348	85	293	Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215540	PLN03010	1.63e-16	42	376	48	391	polygalacturonase
177865	PLN02218	3.74e-16	32	355	60	404	polygalacturonase ADPG
215120	PLN02188	1.96e-13	6	367	9	382	polygalacturonase/glycoside hydrolase family protein
227721	Pgu1	2.98e-13	23	315	65	418	Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BAE66335.1|GH28	1.22e-273	1	456	1	458
UDD65679.1|GH28	1.22e-273	1	456	1	458
CAK48512.1|GH28	2.22e-273	1	451	1	452
QRD92579.1|GH28	7.01e-273	1	456	1	458
CAA63912.1|GH28|3.2.1.171	9.02e-273	1	451	1	452

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1RMG_A	4.46e-219	21	444	1	422	Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q0CFC7|RHGB_ASPTN	0.0	1	526	1	526	Probable rhamnogalacturonase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=rhgB PE=3 SV=1
sp|Q2TWN8|RHGB_ASPOR	2.16e-274	1	456	1	458	Probable rhamnogalacturonase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rhgB PE=3 SV=1
sp|A2R3G4|RHGB_ASPNC	3.95e-274	1	451	1	452	Probable rhamnogalacturonase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgB PE=3 SV=1
sp|P87161|RHGB_ASPNG	1.60e-273	1	451	1	452	Rhamnogalacturonase B OS=Aspergillus niger OX=5061 GN=rhgB PE=1 SV=1
sp|B0Y0Q3|RHGB_ASPFC	5.28e-270	1	456	1	457	Probable rhamnogalacturonase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=rhgB PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000300	0.999652	CS pos: 20-21. Pr: 0.9675

TMHMM  Annotations     

There is no transmembrane helices in ATEG_07607-t26_1-p1.