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CAZyme Information: ATCC64974_64040-t41_1-p1

You are here: Home > Sequence: ATCC64974_64040-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus niger
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus niger
CAZyme ID ATCC64974_64040-t41_1-p1
CAZy Family GH43|CBM91
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
342 OGUI01000010.1|CGC15 37403.47 5.0269
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AnigerN402ATCC64974 11187 N/A 0 11187
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 31 328 1.1e-74 0.9834983498349835

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
214750 Glyco_10 2.40e-82 74 327 1 262
Glycosyl hydrolase family 10.
395262 Glyco_hydro_10 7.59e-78 31 327 1 307
Glycosyl hydrolase family 10.
226217 XynA 4.31e-67 7 327 3 336
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.66e-181 1 335 1 336
4.62e-180 1 335 1 331
1.38e-177 1 335 1 336
2.37e-166 1 335 1 332
6.39e-165 1 337 1 338

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.88e-49 31 332 4 302
Crystal Structure of the catalytic domain of xylanase A from Streptomyces halstedii JM8 [Streptomyces halstedii]
8.29e-45 31 335 28 347
Chain A, 1,4-BETA-D-XYLAN-XYLANOHYDROLASE [Acetivibrio thermocellus],1XYZ_B Chain B, 1,4-BETA-D-XYLAN-XYLANOHYDROLASE [Acetivibrio thermocellus]
1.02e-43 46 327 26 337
Highly active enzymes by automated modular backbone assembly and sequence design [synthetic construct]
1.07e-43 31 332 22 336
Crystal structure of native xylanase 10B from Thermotoga petrophila RKU-1 [Thermotoga petrophila RKU-1],3NIY_B Crystal structure of native xylanase 10B from Thermotoga petrophila RKU-1 [Thermotoga petrophila RKU-1],3NJ3_A Crystal structure of xylanase 10B from Thermotoga petrophila RKU-1 in complex with xylobiose [Thermotoga petrophila RKU-1],3NJ3_B Crystal structure of xylanase 10B from Thermotoga petrophila RKU-1 in complex with xylobiose [Thermotoga petrophila RKU-1]
1.08e-43 27 332 1 312
The mutant crystal structure of b-1,4-Xylanase (XynAS9_V43P/G44E) from Streptomyces sp. 9 [Streptomyces sp.],3WUG_A The mutant crystal structure of b-1,4-Xylanase (XynAS9_V43P/G44E) with xylobiose from Streptomyces sp. 9 [Streptomyces sp.]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.49e-42 52 332 52 326
Probable endo-1,4-beta-xylanase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=xlnC PE=2 SV=2
1.49e-42 52 332 52 326
Probable endo-1,4-beta-xylanase C OS=Aspergillus terreus OX=33178 GN=xlnC PE=2 SV=1
1.38e-41 31 335 518 837
Endo-1,4-beta-xylanase Z OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=xynZ PE=1 SV=3
2.27e-41 52 333 50 327
Endo-1,4-beta-xylanase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=xlnC PE=1 SV=1
5.87e-40 50 326 50 347
Beta-1,4-xylanase OS=Dictyoglomus thermophilum OX=14 GN=xynA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000274 0.999695 CS pos: 22-23. Pr: 0.9696

TMHMM  Annotations      help

There is no transmembrane helices in ATCC64974_64040-t41_1-p1.