CAZyme Information: ATCC64974_62900-t41_1-p1

Basic Information

• Species: Aspergillus niger
• Lineage: Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus niger
• CAZyme ID: ATCC64974_62900-t41_1-p1
• CAZy Family: GH43
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1318	OGUI01000009.1|CGC3	144076.87	4.3927

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AnigerN402ATCC64974	11187	N/A	0	11187

• Gene Location: location=OGUI01000009.1:77778-82196(+)

Full Sequence      

MVEKAQEALAVMNEGRLAHPQFNQYSFKAGASTVQAEAAPALNYEDASTHNAAKNATKRS
GRKGDQTYTYSIPPELAEAARLVAEASPQPVPTDYGVDISLVVSKYRKYDNNDTNVPKQK
YVEPNGLDGYVHTGQPEDSPEIHTELKKRATTDFWLTQMGDSGSSPYAPDGYKVWRNVRD
YGAKGDGITDDTAAINKAISDGGRCGAECGSSTIYPAFVYFPAGKYLVSSPIIQYYNTEF
YGNPFDYPTILAASSFVGLGVITSDVYTGDDTEWYINQNNFLRSIRNFKMDITRTDPNAY
VCAIHWQVAQGTSLENIEFYMIQDGLTTQQGIYMENGSGGFLTNLTFVGGNFGAYFGNQQ
FTSTSLTFMNCKTALQVHWDWAWTMQDVVVENCTNGIVIVGGAGGPKSTGQSVGSLILVD
AVIANTQTGIVTTLLAENSTSFLLQGVVFIEVDTAILDSAQGKTLMAGGSNVPVFSWGFG
RVVTTGAESTFYNGQDIPRTNRSVPLTTIGYIEPNFYLRRRPTYRDIGMSQVINVKDWGA
AGDGKTDDTAVLNSILDRAANMSSIVFFPYGVYIIRDTLRVPVNSRIMGQVWSQIMATGP
RFQDEQNPHIAVQVGQVGDRGIVEIQSLMFTVSGPTAGAVLMEWNVHQVIQGSAGMWDSH
FRVGGATGSQLQADECPKGSGVVLPACKAASLLLHLTSQSSAYLENIWLWVADHDLDLQD
QAQIDVYSARGLLVESQGPTWLYGTASEHNVLYQYQVSQARDLYMGMIQTESPYFQNVPP
APSPFSPGLFPNDPTFSDCDSDSQTCPVSWALRIIDSTSVYSMGAGIYSWFSAYSQDCLD
TESCQQHAVEISQSTNTWLYNLVTKGFAEMVTPTNEHPTLSADNVNGFMSSILAWVRPAN
TTIGARKFPGFQLYQPKWLDGLTDTCKTALSQKILCHPYLEMKFSNPGIGQYIDNNTLAD
EVCDQGCGESLQMWTTNVANSCLNQTIDDTDPVAAGGYIYAGYNLTCLRDPHTKEYCPDV
LSHFTIVDSVRSMTLAEMCSYCFTTSLEMRQASPYAAYTDVDKDALETVNANCGLSGPTD
LHKPLYTEDEVDRPICMSGITHTTSEGDTCDLLAYKYHVASAAIQLANPMLVNDCSELIP
GRQLCMPLSCDTQYTLQDNDTCLSIEWAQPIGFGEVRRYNPWLNADCTNLQTTRQVHGSV
LCLSPQGGSHNVTGTGSPRPGISDGYTNVVQYAPTNSTIAKGTTCYCGKWYTVQQGDSCA
TICIKQGIPSSLFLAVNPSLSTSDCDTSLQVGYTYCVGPDTHWDDTDDFWGEFACEAY

Enzyme Prediction     

EC	3.2.1.58:16

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH55	144	895	1.4e-284	0.9932432432432432

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
403800	Pectate_lyase_3	2.59e-95	175	395	1	210	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
403800	Pectate_lyase_3	2.21e-09	533	590	2	61	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
197609	LysM	1.67e-06	1250	1297	1	44	Lysin motif.
212030	LysM	3.45e-05	1249	1297	1	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
227721	Pgu1	3.72e-05	177	227	84	125	Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CAK47332.1|GH55	0.0	12	1318	1	1324
EAA66649.1|CBM50|GH55	0.0	1	1308	65	1377
EAA67102.1|GH55	0.0	1	1303	66	1368
BCS21778.1|CBM50|GH55	0.0	2	1303	67	1362
CZS83162.1|GH55	0.0	1	1308	51	1356

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5M5Z_A	7.72e-204	150	895	2	752	Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila],5M60_A Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila]
3EQN_A	1.78e-185	154	897	26	757	Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|D4B0V1|E13B_ARTBC	9.42e-206	140	892	29	870	Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02077 PE=1 SV=1
sp|P49426|EXG1_COCCA	1.61e-150	138	892	31	781	Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum OX=5017 GN=EXG1 PE=1 SV=1
sp|P53626|E13B_TRIHA	4.21e-50	136	846	19	706	Glucan endo-1,3-beta-glucosidase BGN13.1 OS=Trichoderma harzianum OX=5544 GN=bgn13.1 PE=1 SV=1
sp|D4AVW3|LYSM5_ARTBC	1.01e-13	1033	1299	46	312	LysM domain-containing protein ARB_00327 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_00327 PE=3 SV=2
sp|D4AY86|LYSM6_ARTBC	4.59e-08	923	1299	38	421	LysM domain-containing protein ARB_01155/01156 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_01155/01156 PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000053	0.000000

TMHMM  Annotations     

There is no transmembrane helices in ATCC64974_62900-t41_1-p1.