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CAZyme Information: ATCC64974_58860-t41_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Aspergillus niger | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus niger | |||||||||||
| CAZyme ID | ATCC64974_58860-t41_1-p1 | |||||||||||
| CAZy Family | GH31 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:25 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 116 | 299 | 3.1e-79 | 0.9893048128342246 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 4.21e-45 | 115 | 301 | 1 | 190 | Amb_all domain. |
| 226384 | PelB | 7.48e-13 | 37 | 344 | 47 | 323 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 7.92e-09 | 126 | 297 | 30 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 5.95e-273 | 13 | 382 | 1 | 370 | |
| 2.67e-263 | 10 | 382 | 1 | 373 | |
| 2.67e-263 | 10 | 382 | 1 | 373 | |
| 1.63e-182 | 22 | 379 | 31 | 388 | |
| 1.63e-182 | 22 | 379 | 31 | 388 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.17e-112 | 27 | 376 | 3 | 355 | Pectin Lyase A [Aspergillus niger] |
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| 3.81e-111 | 27 | 376 | 3 | 355 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
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| 5.22e-106 | 27 | 376 | 3 | 356 | Pectin Lyase B [Aspergillus niger] |
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| 5.19e-07 | 118 | 300 | 66 | 249 | Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5] |
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| 3.18e-06 | 126 | 344 | 76 | 333 | Chain A, PECTATE LYASE E [Dickeya chrysanthemi] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.06e-273 | 13 | 382 | 1 | 370 | Probable pectin lyase E OS=Aspergillus niger OX=5061 GN=pelE PE=3 SV=1 |
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| 1.23e-126 | 7 | 379 | 3 | 379 | Pectin lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelA PE=1 SV=2 |
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| 1.51e-122 | 27 | 376 | 22 | 375 | Probable pectin lyase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelA PE=3 SV=1 |
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| 7.53e-122 | 27 | 376 | 23 | 371 | Probable pectin lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelC PE=3 SV=1 |
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| 7.53e-122 | 27 | 376 | 23 | 371 | Probable pectin lyase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000444 | 0.999522 | CS pos: 21-22. Pr: 0.9764 |