CAZyme Information: ATCC64974_52350-t41_1-p1

Basic Information

• Species: Aspergillus niger
• Lineage: Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus niger
• CAZyme ID: ATCC64974_52350-t41_1-p1
• CAZy Family: GH28
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
710		75534.00	4.8797

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AnigerN402ATCC64974	11187	N/A	0	11187

• Gene Location: location=OGUI01000007.1:2990446-2992807(-)

Full Sequence      

MDSKYKPNYTVFRNVVKDFGADNTGKKDAAAAISAAIKAGPTNGPDRSSSSMGTTGQPAV
IYLPAGTYLMKSSLQLYVGTVIIGDPTNPPVLKASSDFKDDHIIYGKDPNFGGTINFYIG
IKNIIIDSTGIGTDKSITLLDWTVSQATQLTNVGFNMPTNTAKHVGLTTQYDYNSNLILN
DLWFKGGATGMKLSGQQWVFKNISFSGTTTGVEAGGTDIVFLGCRFEQGTLGIDAQGTSG
SLTVVDTTGVGMGTLISSSSSSTAGNSIVLDNVQNSGATVKIGGQTTLSGNVANTWVHGH
LYTSKNAKFQSQQGQTVTTSRSSSLLSGKNYFTMAPPTYQEYGTGQVLNIKNVPGIPVYG
DGETDDTHNINLILSRYKSSCSLMYFPAGTYIVTDTIFVPAGTRIIGDAFASTISAVGSN
FEDESAPRAMFRVGYPGDVGVAQVSDMVFTVADVLPGCKLVEINIAARSPGDVGFWNTHF
RIGGAAGSQVESKCTSDPNNCKAAWGLLHLTTTSSAYIENMWGWTADHDLDGDNPQTIST
GRGLLVEGTAATWLIGTGSEHNTLYQYNFQYARNVFTAMQQSETPYWQGAGSRALNPAPW
TYLDSSDPDYSNCAASDSKCRMALFERIYGSSDLFLYGGCNWVFFNNNGDCSGDCQTNAI
DIANSTSIYLYGTNTKSTTNMVLEGTKVIATQSDNAGGWGGVIAGYLYDS

Enzyme Prediction     

No EC number prediction in ATCC64974_52350-t41_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH55	6	706	2.6e-223	0.9567567567567568

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
403800	Pectate_lyase_3	4.80e-53	12	234	1	213	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
403800	Pectate_lyase_3	6.82e-05	360	421	11	74	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CAK47731.1|GH55	0.0	1	710	236	945
BCS06656.1|GH55	0.0	1	710	110	819
BCR94046.1|GH55	0.0	1	710	110	819
QMW46035.1|GH55	0.0	1	708	123	828
QMW33981.1|GH55	0.0	1	708	123	828

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5M5Z_A	1.82e-99	7	695	23	742	Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila],5M60_A Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila]
3EQN_A	8.80e-93	9	706	46	755	Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|D4B0V1|E13B_ARTBC	2.28e-99	9	704	63	871	Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02077 PE=1 SV=1
sp|P49426|EXG1_COCCA	2.54e-85	7	695	65	773	Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum OX=5017 GN=EXG1 PE=1 SV=1
sp|P53626|E13B_TRIHA	5.67e-85	42	706	81	760	Glucan endo-1,3-beta-glucosidase BGN13.1 OS=Trichoderma harzianum OX=5544 GN=bgn13.1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000054	0.000000

TMHMM  Annotations     

There is no transmembrane helices in ATCC64974_52350-t41_1-p1.