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CAZyme Information: ATCC64974_44410-t41_1-p1

You are here: Home > Sequence: ATCC64974_44410-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus niger
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus niger
CAZyme ID ATCC64974_44410-t41_1-p1
CAZy Family GH18
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
282 OGUI01000007.1|CGC6 32839.07 4.7456
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AnigerN402ATCC64974 11187 N/A 0 11187
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in ATCC64974_44410-t41_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT34 36 226 8.6e-30 0.8658536585365854

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
368535 Glyco_transf_34 1.41e-16 61 222 59 231
galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologs where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.
215617 PLN03182 6.56e-07 43 146 163 264
xyloglucan 6-xylosyltransferase; Provisional
215616 PLN03181 1.20e-05 52 156 172 275
glycosyltransferase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.94e-122 25 278 1 242
5.10e-97 17 265 61 308
1.56e-96 20 264 302 548
3.21e-96 1 263 98 359
6.57e-92 20 263 39 284

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.86e-06 43 146 70 171
Chain A, Xyloglucan 6-xylosyltransferase 1 [Arabidopsis thaliana],6BSU_B Chain B, Xyloglucan 6-xylosyltransferase 1 [Arabidopsis thaliana],6BSV_A Chain A, Xyloglucan 6-xylosyltransferase 1 [Arabidopsis thaliana],6BSV_B Chain B, Xyloglucan 6-xylosyltransferase 1 [Arabidopsis thaliana],6BSW_A Chain A, Xyloglucan 6-xylosyltransferase 1 [Arabidopsis thaliana],6BSW_B Chain B, Xyloglucan 6-xylosyltransferase 1 [Arabidopsis thaliana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.85e-09 12 222 113 332
Uncharacterized alpha-1,2-galactosyltransferase C1289.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1289.13c PE=3 SV=1
6.89e-09 52 156 164 267
Probable glycosyltransferase 7 OS=Oryza sativa subsp. indica OX=39946 GN=GT7 PE=3 SV=2
6.89e-09 52 156 164 267
Probable glycosyltransferase 7 OS=Oryza sativa subsp. japonica OX=39947 GN=GT7 PE=2 SV=1
4.17e-08 22 175 152 332
Probable glycosyltransferase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=GT6 PE=2 SV=1
1.00e-07 22 175 152 332
Probable glycosyltransferase 6 OS=Oryza sativa subsp. indica OX=39946 GN=GT6 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000017 0.000027

TMHMM  Annotations      help

There is no transmembrane helices in ATCC64974_44410-t41_1-p1.