CAZyme Information: ATCC64974_4380-t41_2-p1

Basic Information

• Species: Aspergillus niger
• Lineage: Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus niger
• CAZyme ID: ATCC64974_4380-t41_2-p1
• CAZy Family: GH18
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
328		36640.61	4.2118

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AnigerN402ATCC64974	11187	N/A	0	11187

• Gene Location: location=OGUI01000001.1:1331261-1332482(+)

Full Sequence      

MTQSFVSFTAVLLTGLLSHSQPAAAVGISCDPNTRPYSAWMTDSVIARRDAILGDFAAGD
DIYPNISRIGLFESTVIRLKDYYDADSCGQVDWHSYTLQGAESLLPAVLNVSFDVNAPLT
VFAAGDPMYHQYDRAPNETYKQALDTLHDAFNARTRDSEGAFWYFNPYPNWGVLEGLYPL
GSFISMWKTYFEPTNTTLSDSLMLSLDLFKDHCHDDSSGLLFHGYDSSKTASWADPTTGA
SSYVWNRALGNWFMTLVDLLERSGKNSAILNETQRDDVYTKYWNVANTIINDADEETGCW
WQVMLHGGEEGNYIESSGSAQFVAITIW

Enzyme Prediction     

No EC number prediction in ATCC64974_4380-t41_2-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH105	122	327	9.7e-44	0.5783132530120482

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
226678	YesR	3.17e-18	123	324	83	274	Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].
400034	Glyco_hydro_88	5.18e-17	131	323	84	261	Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CAK42095.1|GH105	1.27e-245	1	323	1	323
BCR99486.1|GH105	3.37e-222	1	323	1	323
BCS11787.1|GH105	3.37e-222	1	323	1	323
BAE63195.1|GH105	2.85e-85	9	322	13	325
QRD85043.1|GH105	2.62e-84	9	322	13	325

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1NC5_A	3.46e-27	70	323	44	284	Structure of Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A	5.71e-27	70	323	34	274	Chain A, Putative glycosyl hydrolase yteR [Bacillus subtilis]
4WU0_A	6.00e-23	138	323	93	271	Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|O34559|URHG2_BACSU	1.78e-26	70	323	44	284	Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
sp|P0A3U6|PIC1_AGRFC	7.29e-11	216	322	35	134	Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
sp|P0A3U7|PIC1_RHIRD	7.29e-11	216	322	35	134	24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000233	0.999732	CS pos: 25-26. Pr: 0.9501

TMHMM  Annotations     

There is no transmembrane helices in ATCC64974_4380-t41_2-p1.