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CAZyme Information: ATCC64974_40800-t41_1-p1

You are here: Home > Sequence: ATCC64974_40800-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus niger
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus niger
CAZyme ID ATCC64974_40800-t41_1-p1
CAZy Family GH16
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
478 OGUI01000006.1|CGC3 50360.67 4.1564
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AnigerN402ATCC64974 11187 N/A 0 11187
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.91:55 3.2.1.4:4

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH6 130 439 2.3e-92 0.9285714285714286

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396075 Glyco_hydro_6 1.04e-161 141 442 13 293
Glycosyl hydrolases family 6.
227616 CelA1 3.70e-45 100 477 24 442
Cellulase/cellobiase CelA1 [Carbohydrate transport and metabolism].
395595 CBM_1 4.84e-12 22 50 1 29
Fungal cellulose binding domain.
197593 fCBD 1.47e-10 21 53 1 33
Fungal-type cellulose-binding domain. Small four-cysteine cellulose-binding domain of fungi

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.20e-315 1 478 1 459
2.00e-295 1 478 1 459
1.64e-294 1 478 1 459
1.64e-294 1 478 1 459
1.28e-275 1 478 1 469

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.98e-188 99 478 1 357
Crystal structure of a fungal chimeric cellobiohydrolase Cel6A [Humicola insolens]
4.08e-188 94 478 1 362
Chain A, CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) [Trichoderma reesei],1QK0_B Chain B, CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) [Trichoderma reesei],1QK2_A Chain A, CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) [Trichoderma reesei],1QK2_B Chain B, CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) [Trichoderma reesei]
4.39e-188 94 478 3 364
Chain A, CELLOBIOHYDROLASE II CORE PROTEIN [Trichoderma reesei]
1.78e-187 94 478 3 364
Chain A, CELLOBIOHYDROLASE II [Trichoderma reesei],1CB2_B Chain B, CELLOBIOHYDROLASE II [Trichoderma reesei],1QJW_A Chain A, CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) [Trichoderma reesei],1QJW_B Chain B, CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) [Trichoderma reesei]
6.70e-187 94 478 1 362
Chain A, Exoglucanase 2 [Trichoderma reesei],4AU0_B Chain B, Exoglucanase 2 [Trichoderma reesei],4AX6_A Chain A, Exoglucanase 2 [Trichoderma reesei],4AX6_B Chain B, Exoglucanase 2 [Trichoderma reesei],4AX7_A Chain A, EXOGLUCANASE 2 [Trichoderma reesei],4AX7_B Chain B, EXOGLUCANASE 2 [Trichoderma reesei],4AX7_C Chain C, EXOGLUCANASE 2 [Trichoderma reesei],4AX7_D Chain D, EXOGLUCANASE 2 [Trichoderma reesei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.92e-316 1 478 1 459
Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=cbhC PE=3 SV=1
2.15e-259 1 478 1 455
1,4-beta-D-glucan cellobiohydrolase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=cbhC PE=1 SV=2
8.73e-233 2 478 3 454
Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=cbhC PE=3 SV=1
8.73e-233 2 478 3 454
Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=cbhC PE=3 SV=1
2.06e-232 6 478 6 468
Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=cbhC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000230 0.999756 CS pos: 18-19. Pr: 0.9808

TMHMM  Annotations      help

There is no transmembrane helices in ATCC64974_40800-t41_1-p1.