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CAZyme Information: ATCC64974_25480-t41_1-p1

You are here: Home > Sequence: ATCC64974_25480-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus niger
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus niger
CAZyme ID ATCC64974_25480-t41_1-p1
CAZy Family CE16
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
680 OGUI01000003.1|CGC20 75750.24 4.2825
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AnigerN402ATCC64974 11187 N/A 0 11187
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in ATCC64974_25480-t41_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH142 30 511 1.2e-155 0.9624217118997912

CDD Domains      help

ATCC64974_25480-t41_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 680 1 679
0.0 1 680 1 679
0.0 12 680 13 678
0.0 12 680 30 695
0.0 12 680 13 678

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.23e-69 34 515 653 1104
Sialidase BT_1020 [Bacteroides thetaiotaomicron]
1.27e-65 34 515 653 1104
Sialidase BT_1020 [Bacteroides thetaiotaomicron]
7.45e-11 34 512 305 809
Crystal structure of GH121 beta-L-arabinobiosidase HypBA2 from Bifidobacterium longum [Bifidobacterium longum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.36e-11 34 680 336 1048
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000243 0.999683 CS pos: 17-18. Pr: 0.9681

TMHMM  Annotations      help

There is no transmembrane helices in ATCC64974_25480-t41_1-p1.