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CAZyme Information: ATCC64974_22790-t41_1-p1

You are here: Home > Sequence: ATCC64974_22790-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus niger
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus niger
CAZyme ID ATCC64974_22790-t41_1-p1
CAZy Family CBM67|GH78
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
225 24057.16 5.1042
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AnigerN402ATCC64974 11187 N/A 0 11187
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:67

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH11 47 223 5.9e-77 0.9943502824858758

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395367 Glyco_hydro_11 4.63e-109 47 221 1 175
Glycosyl hydrolases family 11.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.07e-163 1 225 1 225
2.07e-163 1 225 1 225
2.07e-163 1 225 1 225
2.07e-163 1 225 1 225
2.07e-163 1 225 1 225

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.25e-95 39 224 4 189
Crystal structure of family 11 xylanase in complex with inhibitor (XIP-I) [Talaromyces funiculosus]
1.82e-94 34 224 14 206
Xylanase 11C from Talaromyces cellulolyticus (formerly known as Acremonium cellulolyticus) [Talaromyces funiculosus],3WP3_B Xylanase 11C from Talaromyces cellulolyticus (formerly known as Acremonium cellulolyticus) [Talaromyces funiculosus]
2.63e-90 39 224 4 189
Chain A, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_B Chain B, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_C Chain C, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_D Chain D, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_E Chain E, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_F Chain F, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_G Chain G, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_H Chain H, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_I Chain I, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_J Chain J, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_K Chain K, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612],5HXV_L Chain L, Endo-1,4-beta-xylanase [Talaromyces cellulolyticus CF-2612]
1.68e-89 39 224 6 192
High resolution structure of GH11 xylanase from Nectria haematococca [Fusarium vanettenii 77-13-4]
3.18e-88 39 224 28 214
Crystal structure of environmental isolated GH11 in complex with xylobiose and feruloyl-arabino-xylotriose [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.69e-164 1 225 1 225
Probable endo-1,4-beta-xylanase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=xlnB PE=3 SV=1
3.69e-164 1 225 1 225
Endo-1,4-beta-xylanase B OS=Aspergillus niger OX=5061 GN=xlnB PE=1 SV=1
2.68e-157 1 225 1 225
Endo-1,4-beta-xylanase B OS=Aspergillus kawachii (strain NBRC 4308) OX=1033177 GN=xlnB PE=3 SV=2
7.13e-120 9 224 11 230
Probable endo-1,4-beta-xylanase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=xlnA PE=3 SV=1
3.00e-119 5 224 6 231
Endo-1,4-beta-xylanase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xlnA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000406 0.999553 CS pos: 27-28. Pr: 0.7243

TMHMM  Annotations      help

There is no transmembrane helices in ATCC64974_22790-t41_1-p1.