You are browsing environment: FUNGIDB
CAZyme Information: ASPWEDRAFT_270838-t33_1-p1
You are here: Home > Sequence: ASPWEDRAFT_270838-t33_1-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Aspergillus wentii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus wentii | |||||||||||
| CAZyme ID | ASPWEDRAFT_270838-t33_1-p1 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:3 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 114 | 299 | 4e-85 | 0.9893048128342246 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 4.63e-40 | 114 | 300 | 2 | 189 | Amb_all domain. |
| 226384 | PelB | 4.15e-19 | 124 | 385 | 97 | 344 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 1.42e-15 | 120 | 297 | 26 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
| 404168 | Beta_helix | 0.003 | 173 | 299 | 1 | 112 | Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.70e-151 | 4 | 385 | 3 | 383 | |
| 4.58e-151 | 4 | 385 | 3 | 385 | |
| 4.58e-151 | 4 | 385 | 3 | 385 | |
| 4.40e-141 | 4 | 385 | 3 | 383 | |
| 1.17e-128 | 6 | 385 | 6 | 380 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.05e-103 | 22 | 384 | 1 | 359 | Pectin Lyase B [Aspergillus niger] |
|
| 5.53e-101 | 23 | 385 | 2 | 359 | Pectin Lyase A [Aspergillus niger] |
|
| 1.43e-98 | 23 | 385 | 2 | 359 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
|
| 3.23e-11 | 120 | 297 | 72 | 276 | Chain A, PECTATE LYASE E [Dickeya chrysanthemi] |
|
| 4.92e-11 | 129 | 300 | 80 | 249 | Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.35e-129 | 15 | 385 | 14 | 380 | Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1 |
|
| 1.43e-123 | 7 | 385 | 8 | 378 | Probable pectin lyase F OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelF PE=3 SV=1 |
|
| 9.10e-122 | 12 | 385 | 9 | 388 | Probable pectin lyase F-1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-1 PE=3 SV=1 |
|
| 1.54e-119 | 10 | 385 | 9 | 382 | Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2 |
|
| 1.54e-119 | 10 | 385 | 9 | 382 | Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000255 | 0.999733 | CS pos: 21-22. Pr: 0.9766 |