CAZyme Information: ASPVEDRAFT_52805-t33_1-p1

Basic Information

• Species: Aspergillus versicolor
• Lineage: Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus versicolor
• CAZyme ID: ASPVEDRAFT_52805-t33_1-p1
• CAZy Family: GH5
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
444	KV878129|CGC1	48922.66	4.6523

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AversicolorCBS583.65	13364	1036611	142	13222

• Gene Location: location=KV878129:30506-31954(+)

Full Sequence      

MRGYFYALAAFAPIFVQAQLSGSVGPLVDYTKKAKHKICDVTDYGAKADGKKDIGFAILK
AWDDCASGGLVYIPPGEYALRQELELKHGKSSAIQLDGVIYRDFDSDYQLFLFRDCEDFE
FFSGNSKGAIQGYGYKYLRNGKYGARLFRFQNVKDFSVHGFAAIDSPAYYFVFDTCSNGE
VYNIIARGVAQLGATDAFDFWGDNIWVHDIEVTNGDECVTVKSPAHNFLIEDIYCNLSGG
TAIGSLVKDTDISDIHYRNLYMNQADPAYVKSHNGDGSLKNVLWENIIVHGGPYVLALNQ
AWGDDVGGKGVQLSNLTFKNWHGENAERSRPVIRLECDEDVPCYDITIEDVNLWTQDGDY
VEWTCENAYGSGACLESDSEKMTAYSTTKTVTKTPSHSATTMPHDLASPLPSDHSFTIPA
MPTSFFPGETPVSKLLSLSAAGGL

Enzyme Prediction     

EC	3.2.1.171:11

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH28	68	369	7.8e-51	0.9476923076923077

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
215540	PLN03010	1.14e-24	37	382	45	399	polygalacturonase
177865	PLN02218	1.75e-23	41	368	70	418	polygalacturonase ADPG
165802	PLN02155	1.60e-22	38	370	27	380	polygalacturonase
178580	PLN03003	4.82e-19	40	410	25	421	Probable polygalacturonase At3g15720
395231	Glyco_hydro_28	9.77e-18	123	374	56	321	Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QMW30240.1|GH28	2.40e-238	5	444	6	447
UDD61982.1|GH28	3.41e-238	5	444	6	447
QRD86711.1|GH28	4.81e-238	5	444	25	466
BAE59733.1|GH28	2.79e-237	5	444	6	447
QMW42312.1|GH28	5.62e-237	5	444	6	447

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1RMG_A	1.82e-143	19	435	1	420	Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|B8NGP8|RHGC_ASPFN	4.27e-239	5	444	6	447	Probable rhamnogalacturonase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgC PE=3 SV=2
sp|Q2UFD2|RHGC_ASPOR	4.96e-238	5	444	6	447	Probable rhamnogalacturonase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rhgC PE=3 SV=1
sp|A2QLQ5|RHGC_ASPNC	9.67e-220	1	444	1	446	Probable rhamnogalacturonase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgC PE=3 SV=1
sp|B8NK45|RHGA_ASPFN	5.31e-148	7	435	8	440	Probable rhamnogalacturonase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgA PE=3 SV=1
sp|Q2U293|RHGA_ASPOR	1.07e-147	7	435	8	440	Probable rhamnogalacturonase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rhgA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000387	0.999587	CS pos: 18-19. Pr: 0.9789

TMHMM  Annotations     

There is no transmembrane helices in ASPVEDRAFT_52805-t33_1-p1.