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CAZyme Information: ASPTUDRAFT_132136-t33_1-p1

You are here: Home > Sequence: ASPTUDRAFT_132136-t33_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus tubingensis
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus tubingensis
CAZyme ID ASPTUDRAFT_132136-t33_1-p1
CAZy Family AA9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
475 49383.54 6.4374
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AtubingensisCBS134.48 12592 767770 274 12318
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.10:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 115 298 4.3e-89 0.983957219251337

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
214765 Amb_all 9.72e-50 117 297 5 185
Amb_all domain.
226384 PelB 1.12e-22 7 383 10 344
Pectate lyase [Carbohydrate transport and metabolism].
366158 Pec_lyase_C 1.13e-20 128 297 32 210
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.
236669 PRK10263 1.07e-05 383 455 310 379
DNA translocase FtsK; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 475 1 475
0.0 1 475 1 475
0.0 1 475 1 475
0.0 1 475 1 476
0.0 1 475 1 476

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.85e-100 23 383 2 359
Pectin Lyase A [Aspergillus niger]
1.48e-99 23 383 2 359
Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger]
2.97e-93 23 382 2 359
Pectin Lyase B [Aspergillus niger]
1.55e-12 126 311 76 289
Chain A, PECTATE LYASE E [Dickeya chrysanthemi]
3.16e-10 131 296 80 244
Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
0.0 1 475 1 476
Probable pectin lyase F OS=Aspergillus niger OX=5061 GN=pelF PE=3 SV=1
0.0 1 475 1 476
Probable pectin lyase F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelF PE=3 SV=1
1.15e-204 1 392 1 392
Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1
1.15e-204 1 392 1 392
Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2
8.36e-191 1 437 1 442
Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000428 0.999559 CS pos: 20-21. Pr: 0.9800

TMHMM  Annotations      help

There is no transmembrane helices in ASPTUDRAFT_132136-t33_1-p1.