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CAZyme Information: ASPTUDRAFT_131606-t33_1-p1

You are here: Home > Sequence: ASPTUDRAFT_131606-t33_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus tubingensis
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus tubingensis
CAZyme ID ASPTUDRAFT_131606-t33_1-p1
CAZy Family AA8|AA3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
362 KV878208|CGC13 37467.74 5.1260
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AtubingensisCBS134.48 12592 767770 274 12318
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.15:80

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 40 361 8.6e-72 0.963076923076923

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 9.51e-153 45 362 1 321
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
177865 PLN02218 2.77e-24 45 355 95 417
polygalacturonase ADPG
227721 Pgu1 3.75e-24 45 280 109 398
Polygalacturonase [Carbohydrate transport and metabolism].
215540 PLN03010 1.41e-22 81 355 120 388
polygalacturonase
215426 PLN02793 1.74e-20 45 353 80 406
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.42e-258 1 362 1 362
2.42e-258 1 362 1 362
2.42e-258 1 362 1 362
2.42e-258 1 362 1 362
2.42e-258 1 362 1 362

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.85e-247 1 362 1 362
Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger],1CZF_B Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger]
9.20e-179 24 362 5 344
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
9.20e-179 24 362 5 344
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
1.32e-176 29 362 2 336
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
2.77e-148 29 358 2 333
Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.30e-259 1 362 1 362
Endopolygalacturonase II OS=Aspergillus niger OX=5061 PE=1 SV=1
4.30e-259 1 362 1 362
Endopolygalacturonase II OS=Aspergillus tubingensis OX=5068 GN=pgaII PE=1 SV=1
1.13e-254 1 362 1 362
Probable endopolygalacturonase II OS=Aspergillus kawachii (strain NBRC 4308) OX=1033177 GN=pgaII PE=3 SV=2
3.10e-252 1 362 1 362
Endopolygalacturonase II OS=Aspergillus awamori OX=105351 GN=pgaII PE=1 SV=1
9.52e-247 1 362 1 362
Probable endopolygalacturonase II OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaII PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000246 0.999714 CS pos: 27-28. Pr: 0.7780

TMHMM  Annotations      help

There is no transmembrane helices in ASPTUDRAFT_131606-t33_1-p1.